Gene Information

Name : Rumal_3976 (Rumal_3976)
Accession : YP_004090285.1
Strain :
Genome accession: NC_014825
Putative virulence/resistance : Virulence
Product : ABC transporter related protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 340687 - 341601 bp
Length : 915 bp
Strand : -
Note : KEGG: dsy:DSY2784 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGGAATATGTTCTGAAAACAAACGGTCTGTGCAAATCTTACCGCCGATACCATATCCTGAACGGTCTGACTATGAATGT
CCCTAAGGGTTCGATATACGGTTTCGTCGGCAAGAACGGCGCAGGCAAAACAACGCTGATAAGATTGATAACGGGTTTGC
AGGATCCTTCAAGCGGTGAGTACACTTTATATGGTACAAAACATACGGACAGCAAAATTTCAAAAGTACGCAGACGTATG
GGTGCTGTGGTGGAAACACCTTCCATCTATCCCGATATGACTGCAAAGGATAATCTCATACAGCAGTACCGCACCCTCGG
TATTTCGGGTTTTGACGGTCTTGAGGATATCCTGAAGCTGGTAGGACTTGAAAATACAGGAAAGAAAAAGGCGAAACATT
TCTCACTGGGTATGCGTCAGCGACTCGGCATCGCAGTTGCCCTCTGCGGAAGTCCCGATCTTCTTGTGCTGGACGAGCCT
GTAAACGGTCTTGACCCACAGGGCATCGTGGAGATAAGAGAGCTTATACTGAAACTCAACCGCGAGAAGAATATCACAGT
GCTTATCTCATCCCATATCCTCGATGAGCTTGCAAAGCTTGCCACACATTACGGTTTTATCGACAGCGGCAAGATCATCA
GGGAAATGAGCGCCGAGGAACTGAACGCCGTATGCCGCAAGTGTATGCGCCTGACTGTCAGCAGCACAGCGATACTGGCA
AAAGTCCTTGACGATATGGGTATCGGATACAGTGTTATCGATGATAACCATGCGGATATCTACTCAAAACCCAACATCAC
ACAGCTTACACTTGCCCTTGCAAAGGAAAACTGTGAAGTTATTTCCTTTGAGGAACACGATGAGAGCCTTGAAAGCTTCT
ATCTGTCATTGGTGGGAGGTGCTGTAAATGCTTGA

Protein sequence :
MEYVLKTNGLCKSYRRYHILNGLTMNVPKGSIYGFVGKNGAGKTTLIRLITGLQDPSSGEYTLYGTKHTDSKISKVRRRM
GAVVETPSIYPDMTAKDNLIQQYRTLGISGFDGLEDILKLVGLENTGKKKAKHFSLGMRQRLGIAVALCGSPDLLVLDEP
VNGLDPQGIVEIRELILKLNREKNITVLISSHILDELAKLATHYGFIDSGKIIREMSAEELNAVCRKCMRLTVSSTAILA
KVLDDMGIGYSVIDDNHADIYSKPNITQLTLALAKENCEVISFEEHDESLESFYLSLVGGAVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 8e-26 42
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 8e-26 42
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 8e-26 42
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 7e-26 42
SH2304 YP_254219.1 ABC-type multidrug transport system, ATPase Not tested ¥ðSh1 Protein 5e-30 41