Gene Information

Name : Rumal_3948 (Rumal_3948)
Accession : YP_004090257.1
Strain :
Genome accession: NC_014825
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 311409 - 312827 bp
Length : 1419 bp
Strand : +
Note : TIGRFAM: pyruvate kinase; KEGG: cpy:Cphy_0741 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta

DNA sequence : 
ATGCGTAAAACCAAGATAGTATGCACCATAGGTCCCGCTACGGATGACGAGAACATCCTCAGGGATATGATGAAGAACGG
CATGGATGTTGCCCGTTTCAATTTTTCACATTCCGAGCATTCCATTCACCAGCAGAGATTTGAGACCATAACCCGTCTGC
GCGACGAAATGGGACTTAATATAGCCACACTGATGGACACAAAGGGTCCTGAGATAAGGCTCAGGGATTTCAAGGATCAC
AAGCCTGTGACGATCAATGACGGCGATATGTTCACCCTGACCACAAGAGATGTGGAAGGCGACAATACTATCTGTTCCAT
AACCTTCCCAAAACTGCCCCAGGATATCACCACAGGCACAAGGATACTCATAAACGACGGTGTGATCGAGCTGAAAGCCG
TTAAGATAGATTCCACAGATATACAGTGCGAGGTCATACACGGCGGCGTGGTATCAGACCACAAGGGTATCAACGTACCG
GGAGTTAAGCTTTCAATGCCCTATATATCCGATGCGGATATGGCTGACCTTGCCTTCGGTGCGAAGATGGGCTTTGATTT
CATCGCGGCATCATTCGTAAGGACCGGTGCTGACGTTACATATCTGAGAAAATTCACCCAGAGTCTCGGCTGGTTCAATC
CGAGGATAATCGCAAAGATAGAGAACGCCGAGGGTGTTGAGAACATTGACGAGATACTTGAAGCCGCTGACGGCATAATG
GTAGCAAGAGGCGACATGGGTGTTGAGATACCTTTCGAGAATATACCTGCAATACAGAAAGAGCTTATACACAAGGCTTA
CAATGCAGGCAAGCAGGTCATCACTGCAACACAGATGCTGGAATCCATGATAAACAATCCCAGACCTACACGTGCGGAGA
TAACCGACGTAGCAAATGCTATATATGACGGAACTTCGGCAATAATGCTCTCGGGTGAGACAGCAGCAGGCAAATATCCT
GTTGAGGTAGTAAAGACCATGAGCCTTATAGCTGAGACCACCGAGGGAGATATCGACTACGTGCGCCGTTTCCAGAAGCG
TGATGATATCGACCACCCCAGTATAACAGACGCTATCTGCCACGCTACAGTCACCACAGCCCACGACCTTAAAGCGGCTG
CCATACTGACAGTTACCAAGAGTGGTGCTACAGCACGTATACTTTCAAAGTACAGACCCGATTGTCCCATAATAGGACTG
ACCACTGACTCCGTTACCTGCCACCAGATGAATATGTCATGGGGCGTTCTTCCGGGTCTTGTTGATGAAATGGACAACAC
CGATGAGCTTATCTCCCGCGCCATAAGAGTCGCACTGGAAAAGGGCTACATCAAGGAAGGTGACCTGGTAGTAATCACAG
CAGGAGTACCCCTCGGTATAAGCGGCACAACCAACCTGATGAAAGTAGAACGCGCCTAG

Protein sequence : 
MRKTKIVCTIGPATDDENILRDMMKNGMDVARFNFSHSEHSIHQQRFETITRLRDEMGLNIATLMDTKGPEIRLRDFKDH
KPVTINDGDMFTLTTRDVEGDNTICSITFPKLPQDITTGTRILINDGVIELKAVKIDSTDIQCEVIHGGVVSDHKGINVP
GVKLSMPYISDADMADLAFGAKMGFDFIAASFVRTGADVTYLRKFTQSLGWFNPRIIAKIENAEGVENIDEILEAADGIM
VARGDMGVEIPFENIPAIQKELIHKAYNAGKQVITATQMLESMINNPRPTRAEITDVANAIYDGTSAIMLSGETAAGKYP
VEVVKTMSLIAETTEGDIDYVRRFQKRDDIDHPSITDAICHATVTTAHDLKAAAILTVTKSGATARILSKYRPDCPIIGL
TTDSVTCHQMNMSWGVLPGLVDEMDNTDELISRAIRVALEKGYIKEGDLVVITAGVPLGISGTTNLMKVERA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-92 46
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-92 46
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 6e-93 46
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-91 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_3948 YP_004090257.1 pyruvate kinase VFG0479 Protein 1e-92 46