Gene Information

Name : Rumal_3832 (Rumal_3832)
Accession : YP_004090148.1
Strain :
Genome accession: NC_014825
Putative virulence/resistance : Unknown
Product : IS66 Orf2 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 159760 - 160116 bp
Length : 357 bp
Strand : +
Note : PFAM: IS66 Orf2 family protein; KEGG: cth:Cthe_0516 IS66 Orf2 like

DNA sequence :
ATGCTGAAGGAACTTTCTGCTGCCAATATCTACATCGTCTGTGGGCATACCGATATGCGTAAATCAATAGACGGTCTTGC
AGCGATAATCAGAGAGGAATTTGATCTCGATCTGTTTTCCGACAGCCTGTTTTTGTTTTGCGGAAGGCGCAGAGATCGAC
TAAAGGCTCTGCTGTGGGAGGGCGACGGATTTATCATGCTGTACAAAAGGCTTGAGAATGGAAAATTCAACTGGCCGCGC
AATGAGCAGGAGGTAAGAAACTTAAGCCACGAGCAGTTTGTATGGCTATTGCAGGGACTATCCGTTGACCAGCCAAAGGC
GATAAAAACTATCGAGGGCGGCATCGATTTTTACTGA

Protein sequence :
MLKELSAANIYIVCGHTDMRKSIDGLAAIIREEFDLDLFSDSLFLFCGRRRDRLKALLWEGDGFIMLYKRLENGKFNWPR
NEQEVRNLSHEQFVWLLQGLSVDQPKAIKTIEGGIDFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08461.1 unknown Not tested SRL Protein 6e-08 43
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 6e-08 42
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-08 42
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 9e-08 42
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 9e-08 42
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 9e-08 42
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-07 42
unnamed AAC31493.1 L0014 Not tested LEE Protein 6e-08 42
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-07 42
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 6e-08 42
unnamed AAL99258.1 unknown Not tested LEE Protein 6e-08 42
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-08 42
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 1e-07 41
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 1e-07 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_3832 YP_004090148.1 IS66 Orf2 family protein VFG1052 Protein 2e-08 43
Rumal_3832 YP_004090148.1 IS66 Orf2 family protein VFG1698 Protein 5e-08 42
Rumal_3832 YP_004090148.1 IS66 Orf2 family protein VFG1709 Protein 3e-08 42
Rumal_3832 YP_004090148.1 IS66 Orf2 family protein VFG0792 Protein 3e-08 42