Gene Information

Name : Rumal_3798 (Rumal_3798)
Accession : YP_004090115.1
Strain :
Genome accession: NC_014825
Putative virulence/resistance : Unknown
Product : IS66 Orf2 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 123239 - 123541 bp
Length : 303 bp
Strand : -
Note : PFAM: IS66 Orf2 family protein; KEGG: cth:Cthe_0516 IS66 Orf2 like

DNA sequence : 
ATGATCGGAGATATAAGCCGTGCAGAGCATGTCTACATCGTGTGCGGATATACAGATATGCGCAAAGCAATAGACGGTCT
GGCTGCTATCGTTCAGCAGAATTTTCAGCTTGACGTGTTCTCGGGGAGCTTGTTTTTGTTCTGCGGAAAACGCTGTGATC
GCATCAAGGCTCTGCTCTGGGAGGAGGACGGTTTTGTGTTGCTGTACAAGCGCCTGGAGAACGGTAAGTACAAATGGCCA
AGGGATTCAAATGAAGCAAAACAGATAACCAGGCAGGAATTCCGTTGGCTGCTTGAAGGGTGA

Protein sequence : 
MIGDISRAEHVYIVCGYTDMRKAIDGLAAIVQQNFQLDVFSGSLFLFCGKRCDRIKALLWEEDGFVLLYKRLENGKYKWP
RDSNEAKQITRQEFRWLLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-13 43
unnamed AAF71493.1 unknown Not tested Hrp PAI Protein 1e-13 43
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 4e-10 41
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 4e-13 41
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 4e-13 41
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 9e-13 41
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 9e-13 41
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 1e-10 41
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 1e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rumal_3798 YP_004090115.1 IS66 Orf2 family protein VFG1517 Protein 2e-10 41