Gene Information

Name : Astex_3234 (Astex_3234)
Accession : YP_004089020.1
Strain :
Genome accession: NC_014817
Putative virulence/resistance : Unknown
Product : transposase is66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 955629 - 957209 bp
Length : 1581 bp
Strand : +
Note : KEGG: smd:Smed_6513 transposase IS66

DNA sequence :
ATGGAAATCATGTCTGCCAACGCCTCTGATGAGCTTGCCGCCCTGCGCGCGCTCGTGGCTGAGCAGGCCCTGCAACTGGA
CAAAAATCGCATTGCGCTCGAAGCCGAGGTTGCCAAGCGGGACGCCATCATCACCCTGCTTCGCGGACAATTAGAGCTGC
TGCGTCATCGCGATCACGGGGCATCGTCCGAAAAGGTCGAGCGTAAAATCGAGCAATACGAGCTGATGCTCGAGGAGATC
GAGGCGACGCGTGCCGAGGCTGAGGCGCGTTCGGGCAAGGACGCGTTGCCGGAGGCGGAAGATGAAAAGGCGCACCCGAA
GCGCAAACCGTTGCCCGACAATCTTCCGCGTGAAGACAAGGTCTATGAGGCGCCGTGCGACTGTCCGACCTGTGGCAGCA
CGTCATTCCTTAAGGCGGCGGATAAGGTCGTCGAGGTCATGGAGCATGTTCCGGCCTCGGTGAAGGTCGTGCGTCATATC
GAAAAGCGCCTGATCTGCAAGGACTGCGACACCACGGTGGCGGGCGAGATGCCTAAGCTTCCGATCACCAGGGGTAAGCC
CGGTCCAAGCCTGCTGGCCCACATCATGGTCGCGAAGTTCGATGATCATATCCCGCTCTACCGCCTGTCGGAAATGTACG
AGCGGATGGGTATTGATATATCCCGATCCGTCATGGCCGACTGGGTGGGGCGAGTATCGCTTCTGATCGAGCCGTTAGTG
ATGTTGGTAAAAGCCTATGTCGTCGGAACCGACCGGATCCACACAGACGACACCCCAGTGGATGTTCTTGATCCTGGGCG
AGGAACGACAGCAACCGGGAGGCTCTGGGTCTATGTCTTCGACGGCAGCGGCTACAAGGACGACCGGCCAAAGGCTGTTG
CCTACTATTACAGTGCCGATCGCAAGGGTATCCACCCTGAGGCGCATCTGGCCGACTTCAGCGGCGTGATGCATGCCGAC
GGCTATGGCGGCTATAAAAAGCTCTATGGCAACAAGATTACCGAGGCAGCGTGTATGGCGCACGTGCGGCGCAAGTTCCA
TGACGTCATCAAGCTCAAAGCCTCGCCTGTGGCCGAGGAAGCCCTGAGCCGTATCGGCGCGCTTTACGACATCGAGGCGC
GCATCCATGGCATGACAGCCGACGAACGGCGCGCCTTACGCCAGCAGCATGCCCGGCCGTTGCTGGATAGTCTCAAGGCC
TGGATCGAGGCGATGCTGCCGACCGTCCCGCAGAAGCAGAAGCTGGCGGAGGCCATGCGCTATGCCTTATCGCGATGGGA
GGCGTTGAGTGTCTACATCGACGATGGGCGTGTCGAGATCGATAACAATATAGCTGAGAGGGCCATCCGCCCGATTGGAA
TCGGAAAAAAGAACTGGCTCTTCGCCGGCTCCGACAAGGGGGGCGAGCGTATCGCCAATGTGCTGACGTTGATCGAGACC
GCCAAAATGCACGGCCACAATCCCGAGACCTACTTCACCCACGTTCTGACGGTGATCCGAAACTATCCGGAAGAGCGGCT
GCATGAACTGCTGCCGTGGGTCATGGCACCGGCAAAACCAGCATCAGGGGTGGCCGCTTAA

Protein sequence :
MEIMSANASDELAALRALVAEQALQLDKNRIALEAEVAKRDAIITLLRGQLELLRHRDHGASSEKVERKIEQYELMLEEI
EATRAEAEARSGKDALPEAEDEKAHPKRKPLPDNLPREDKVYEAPCDCPTCGSTSFLKAADKVVEVMEHVPASVKVVRHI
EKRLICKDCDTTVAGEMPKLPITRGKPGPSLLAHIMVAKFDDHIPLYRLSEMYERMGIDISRSVMADWVGRVSLLIEPLV
MLVKAYVVGTDRIHTDDTPVDVLDPGRGTTATGRLWVYVFDGSGYKDDRPKAVAYYYSADRKGIHPEAHLADFSGVMHAD
GYGGYKKLYGNKITEAACMAHVRRKFHDVIKLKASPVAEEALSRIGALYDIEARIHGMTADERRALRQQHARPLLDSLKA
WIEAMLPTVPQKQKLAEAMRYALSRWEALSVYIDDGRVEIDNNIAERAIRPIGIGKKNWLFAGSDKGGERIANVLTLIET
AKMHGHNPETYFTHVLTVIRNYPEERLHELLPWVMAPAKPASGVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 3e-100 45
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-89 44
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 3e-94 43
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-95 43
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 4e-95 43
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-95 43
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 4e-95 43
tnp AEA34686.1 transposase Not tested Not named Protein 2e-95 43
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 2e-95 43
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-95 43
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 3e-94 43
unnamed AAL57570.1 unknown Not tested LEE Protein 6e-95 43
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-94 43
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 3e-85 43
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 6e-86 43
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 6e-86 43
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-85 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Astex_3234 YP_004089020.1 transposase is66 VFG0793 Protein 2e-95 43
Astex_3234 YP_004089020.1 transposase is66 VFG1736 Protein 1e-66 41