Gene Information

Name : Astex_3222 (Astex_3222)
Accession : YP_004089008.1
Strain :
Genome accession: NC_014817
Putative virulence/resistance : Resistance
Product : abc transporter related protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 940808 - 941494 bp
Length : 687 bp
Strand : +
Note : KEGG: srm:SRM_01931 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGCCGCTGATCCAGCTCTCGCACATCCATCATACCTATGCCGAAAATGCGCGCCCGGTGAACGCCCTGCGCGGTGTCAG
TCTGGACATCGAAGCGGGTGAATTTGTCGCCATTGTCGGGCCGTCGGGCAGCGGGAAATCCACCCTGCTCAATATTATCG
GCACGCTGGAAAGCCCCAGTCAGGGCGAATATCGCTTTGACGGCCAGTCCGTCGCCGAGATGTCGGGCCGTGAACGGGCT
CAGTTGCGGGCCTCACGCATCGGCTTCGTCTTCCAGAACTTCAACCTGATCGACCACCTGACGGTGTTTGAAAACATCCG
GCTGGGGCTGCGCTATCGGCGGGATCATCTGAAAAACGAAAACGAACGGATACTGAGCGCCATGGACAAGGTCGGTCTGG
CGCACCGGGCCGACCATCTGCCGCGCGAATTGTCAGGCGGGCAGCAGCAGCGCTGCGCCATTGCCCGCGCCATCGTGGGC
GACCCGCAGATCGTGCTTGCCGACGAACCGACGGGCAGTCTGGACTCGCAAAATGCCGCTCAGGTTCTGGGTATTCTGGC
GGAACTCAATAGCCGTGGCACAACACTGGTCATCGTGACGCACGCCCCACGTCAGGCCGACCGCGCCGGACGGGTGGTCG
AAATGCACGATGGCAGCATCCATCTTTCGACCCGGCGTCTGGCATGA

Protein sequence :
MPLIQLSHIHHTYAENARPVNALRGVSLDIEAGEFVAIVGPSGSGKSTLLNIIGTLESPSQGEYRFDGQSVAEMSGRERA
QLRASRIGFVFQNFNLIDHLTVFENIRLGLRYRRDHLKNENERILSAMDKVGLAHRADHLPRELSGGQQQRCAIARAIVG
DPQIVLADEPTGSLDSQNAAQVLGILAELNSRGTTLVIVTHAPRQADRAGRVVEMHDGSIHLSTRRLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-33 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Astex_3222 YP_004089008.1 abc transporter related protein NC_008702.1.4606598. Protein 4e-43 50
Astex_3222 YP_004089008.1 abc transporter related protein NC_012469.1.7686878. Protein 1e-48 45
Astex_3222 YP_004089008.1 abc transporter related protein CP001581.1.gene798.p Protein 3e-37 44
Astex_3222 YP_004089008.1 abc transporter related protein NC_012469.1.7685735. Protein 4e-40 43
Astex_3222 YP_004089008.1 abc transporter related protein NC_012469.1.7686946. Protein 5e-30 42
Astex_3222 YP_004089008.1 abc transporter related protein CP001581.1.gene598.p Protein 8e-37 41
Astex_3222 YP_004089008.1 abc transporter related protein CP003583.1.gene613.p Protein 5e-26 41