Gene Information

Name : Astex_0573 (Astex_0573)
Accession : YP_004086412.1
Strain :
Genome accession: NC_014816
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 609916 - 610617 bp
Length : 702 bp
Strand : +
Note : KEGG: pzu:PHZ_c2688 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain); PFAM: transcriptional regulator domain-containing protein; response regulator receiver; SMART: response regulator receiver; transcriptional regulat

DNA sequence : 
ATGCCGCCTTCGTCCATATTGTTGATCGAAGATGAACCCGAAGGGGCGGCGATCGTCGGTGAAGCCCTGACCCGGGAGGG
CTATGAGGTCGTCTGGCGCGCGACGGCGTCAGCTGGCCTCAGCGAGGCCGGGCTAGGTCAGCATCACCTGATCATACTCG
ACCGGATGCTTGGCAATACTGATGGCTTAAACGTTCTCACAACCCTTCGCGAGGCCGGGATAACCACACCCATTCTGGTA
CTGTCGGCCCTGGCGCGCAGTGAAAACCGTATCGACGGGCTTGACAGCGGGGCAGATGACTATCTTGGCAAACCTTTTGA
ACCTAAGGAGCTTCTTGCTCGGGTTCGCGCTCTGATCCGCCGCTCGCAGAACCGCATGCATAGCGCCATACTAATCTACG
GCGATCTGGAACTGCACGTTAAGTCGCGCACGGCGCATCGCGCCGGGCGACATTTGGCCTTAAGTCCTAAAGAGTTCGAA
ATTCTCAAGCTCCTGATGGAACACGCGGGGGATGTGGTTACACGCGACATGTTGTTGCAGAAGGTGTGGAGGCTCAATTT
CGACCCGCAGACGAATGTCATTGACGTCAACATGAGCCGTCTTAGAAATCGCCTTGAAGACGGTTTTGAACAACCCGTGC
TGGAGACCGTCAGAGGGATAGGGTTTCGCCTGATCTGTCCCGTCAGCGAGGCGAACCTTTGA

Protein sequence : 
MPPSSILLIEDEPEGAAIVGEALTREGYEVVWRATASAGLSEAGLGQHHLIILDRMLGNTDGLNVLTTLREAGITTPILV
LSALARSENRIDGLDSGADDYLGKPFEPKELLARVRALIRRSQNRMHSAILIYGDLELHVKSRTAHRAGRHLALSPKEFE
ILKLLMEHAGDVVTRDMLLQKVWRLNFDPQTNVIDVNMSRLRNRLEDGFEQPVLETVRGIGFRLICPVSEANL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Astex_0573 YP_004086412.1 winged helix family two component transcriptional regulator BAC0197 Protein 6e-41 43
Astex_0573 YP_004086412.1 winged helix family two component transcriptional regulator BAC0308 Protein 1e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Astex_0573 YP_004086412.1 winged helix family two component transcriptional regulator VFG0596 Protein 8e-36 41