Gene Information

Name : Astex_0518 (Astex_0518)
Accession : YP_004086363.1
Strain :
Genome accession: NC_014816
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 541901 - 542089 bp
Length : 189 bp
Strand : +
Note : KEGG: dra:DR_2454 PbsX family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein

DNA sequence :
ATGAAAAATCGTCTCAAAGTCCTGCGTGCGGAACACAACCTGTCTCAGGCCGATTTGGCCCAGAAGCTGGATGTGTCACG
CCAGACCGTGAATGCCATCGAAACGGAGAAGTACGATCCCTCCCTGCCGCTGGCTTTCAAAATCGCCGACGTCTTCGCCC
TGAAAATCGAAGACATCTTCCAACCTTAA

Protein sequence :
MKNRLKVLRAEHNLSQADLAQKLDVSRQTVNAIETEKYDPSLPLAFKIADVFALKIEDIFQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-09 55
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-09 55
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-11 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Astex_0518 YP_004086363.1 XRE family transcriptional regulator VFG2175 Protein 2e-09 55
Astex_0518 YP_004086363.1 XRE family transcriptional regulator VFG2168 Protein 2e-09 55