Gene Information

Name : Astex_2223 (Astex_2223)
Accession : YP_004088030.1
Strain :
Genome accession: NC_014816
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 2407551 - 2408717 bp
Length : 1167 bp
Strand : +
Note : TIGRFAM: nucleotide sugar dehydrogenase; KEGG: vha:VIBHAR_00706 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation

DNA sequence : 
ATGAAGATTGCTATTGCTGGGATGGGGTATGTTGGCCTGTCCAATTCCATGCTTCTGGCGCGTCACAATGAGGTCGTGGC
CTTTGACGTGGTTCCTGAAAAAGTCGAAATGCTCAATGCGCGCCAGTCGCCTATCGTAGACGCTGAGATCGAGCACTTCC
TCGCCAAAGAGCCTATTAACTTCCGCGCGACACTCAATGCCGAAGAGGCGTTTTCAGGCGCCGATTACATTATTGTGGCG
ACGCCTACCAATTACGATACCGAAACCAACCGCTTTGATACGCGTTCTATTGAGAGCGTCATTCGGACGGTTCTGCCACT
AAACTCGACCGCGACCATCGTGATCAAATCCACCATCCCCGTCGGCTATACGGCGCGGGTAAGGGAGATGCTTGGGACGA
ACCAGGTGATTTTCTCGCCTGAATTCCTCCGGGAAGGTAAGGCCCTTTACGACAACCTCTATCCGTCCCGCATTGTTGTC
GGTGAGCGATCGGAGCGCGCGAAGGTCTTTGCCGACCTTCTGGTGAAAGGGGCCGAGAAAAAAGATATTGAGGTATTGTT
CACCGACAGCAATGAGGCTGAGGCGATTAAGCTCTTTGCAAATACCTATCTGGCGCTTCGGGTCGCCTATTTTAATGAGC
TCGATTCCTATGCGGAGGCGTTAGGGCTTGATACGCGCCAGATTATTGAGGGCGTGAGCCTCGATCCCCGAATTGGCAAG
GGATATAACAACCCGTCCTTCGGATACGGAGGCTATTGCCTGCCGAAGGATACAAAGCAGCTTCTGGCCAACTATTCCGA
AGTGCCGCAAAACCTGATCAAGGCCATTGTGGACGCGAACACGACCCGCAAGGATTTCGTGGCTTCACGGATTCTCGCGA
ACGCGCCGAAGACGGTCGGGATCTACCGGCTGACCATGAAGACAAATTCTGACAATTTCCGGGATTCTTCGGTGCAGGGG
ATCATGAAACGGCTCAAAGCCAAGGGCGTCGAAGTCATCATTTATGAACCCGCGCTTGAGGCCGAGGACTTCTTCAGCTC
AAAGGTGATCCGGGACCTCGAGGATTTCAAGACTCGCTCAGATGTCATCGTCGCAAACCGGATATCAGACGATATTCGCG
ACGTGGTCGACAAGGTTTATACGCGCGATCTCTTCGGCGCTGACTAA

Protein sequence : 
MKIAIAGMGYVGLSNSMLLARHNEVVAFDVVPEKVEMLNARQSPIVDAEIEHFLAKEPINFRATLNAEEAFSGADYIIVA
TPTNYDTETNRFDTRSIESVIRTVLPLNSTATIVIKSTIPVGYTARVREMLGTNQVIFSPEFLREGKALYDNLYPSRIVV
GERSERAKVFADLLVKGAEKKDIEVLFTDSNEAEAIKLFANTYLALRVAYFNELDSYAEALGLDTRQIIEGVSLDPRIGK
GYNNPSFGYGGYCLPKDTKQLLANYSEVPQNLIKAIVDANTTRKDFVASRILANAPKTVGIYRLTMKTNSDNFRDSSVQG
IMKRLKAKGVEVIIYEPALEAEDFFSSKVIRDLEDFKTRSDVIVANRISDDIRDVVDKVYTRDLFGAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 4e-92 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Astex_2223 YP_004088030.1 nucleotide sugar dehydrogenase VFG0963 Protein 1e-98 53