Gene Information

Name : Astex_1558 (Astex_1558)
Accession : YP_004087375.1
Strain :
Genome accession: NC_014816
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1682761 - 1683597 bp
Length : 837 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: bac:BamMC406_2352 integrase catalytic region

DNA sequence :
GTGCTTGAGCTAAGGCGCCAATACCCGATTGCAGGCCTACTGAAACTAGCAGGGTTGGCTCGTAGTACCTTCTATTATCA
GCAGAAAGCGCTTCTTGCCGGCGATAAACACGAAAAGACAAGAGTGAGCATCCAGACGGTCTACGACCGCCACAAAGGCC
GGTATGGCTATCGTCGGATTACCGCTGCGCTCAAGCTTCTGGGCACGATCGTCAACCACAAGACGGTTCAACGTTTGATG
AGGCAAATGGGCCTGAAGTCGTTGGTAAGATCCAAGAAATACAAGTCCTACAAAGGGGCTGTCGGACGAACGGTGCCCGA
TCTTCTTCAGCGCCAGTTCGATGCGCCAGGCATCAACCAAAAATGGGTGACGGATGTGACCGAGTTCAAAGTAGCTGGTG
AAAAACTCTATCTTTCACCCGTCATGGATCTATACAATCGAGAAATCATCGCCTTTGAAACTGCCAGGCATCCTGTTTTT
AAGCTCGTCGGAAACATGCTCGAGAAGGCCTTGAACAAACTGGGAAAGGACGAGAAACCCACAATCCATTCCGACCAGGG
CTGGCACTATCAGATGCCAGAATATCAACGAAAACTCGAGGAAAGCCACGTCCTCCAGAGCATGTCACGAAAAGGGAACT
GTCTAGACAACGCCCCCATTGAAAGCTTCTTCGCCGTCCTGAAATCTGAGTTCTTCTATCTCGAAAAGTTTGACAGCTTC
GAAGCCCTTCAAGAAGGCATCGAAACCTACATCCACTATTACAATAATGACCGTATCAAGCTAAAATTAAATGGGCTGAG
CCCTGTGCAATACAGAACTCAGCCCTTAACCGCCTAG

Protein sequence :
MLELRRQYPIAGLLKLAGLARSTFYYQQKALLAGDKHEKTRVSIQTVYDRHKGRYGYRRITAALKLLGTIVNHKTVQRLM
RQMGLKSLVRSKKYKSYKGAVGRTVPDLLQRQFDAPGINQKWVTDVTEFKVAGEKLYLSPVMDLYNREIIAFETARHPVF
KLVGNMLEKALNKLGKDEKPTIHSDQGWHYQMPEYQRKLEESHVLQSMSRKGNCLDNAPIESFFAVLKSEFFYLEKFDSF
EALQEGIETYIHYYNNDRIKLKLNGLSPVQYRTQPLTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 7e-75 55
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 5e-58 53
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 5e-58 53
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 2e-75 53
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 6e-51 44
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 1e-51 44