Gene Information

Name : Astex_1447 (Astex_1447)
Accession : YP_004087265.1
Strain :
Genome accession: NC_014816
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1562055 - 1562267 bp
Length : 213 bp
Strand : +
Note : KEGG: swd:Swoo_4745 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein

DNA sequence :
ATGAAGAACCGCCTGAAAGACCTGCGCACTGAGGCCGGTCTGACCCAGGCCGATCTGGCCGCCCGCCTCAACGTCTCGCG
GCAGGCCGTTATCGCCATCGAGTCCGACAAACATGATCCGTCGCTCGATCTGGCCTATCGTATCGCCGCCATTTTCGACC
TTGCCGTCGAAGCGATTTTTGAAAATCCGCATCGCCTGAACTCAGGCGAATAA

Protein sequence :
MKNRLKDLRTEAGLTQADLAARLNVSRQAVIAIESDKHDPSLDLAYRIAAIFDLAVEAIFENPHRLNSGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-06 46
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-06 46
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-10 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Astex_1447 YP_004087265.1 XRE family transcriptional regulator VFG2168 Protein 5e-07 46
Astex_1447 YP_004087265.1 XRE family transcriptional regulator VFG2175 Protein 5e-07 46