Gene Information

Name : ML5_0856 (ML5_0856)
Accession : YP_004080551.1
Strain : Micromonospora sp. L5
Genome accession: NC_014815
Putative virulence/resistance : Unknown
Product : transposase is3/is911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 865614 - 865922 bp
Length : 309 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: scb:SCAB_90841 IS transposase

DNA sequence :
ATGTCACGCCCTTCCCCTTATCCCCGTGAGTTGCGTGAGCGAGCGGTGCGGATGGTCGCTGAGGTGCGGCCGAACTATGA
GTCGGAGTACGCGGCGATCGGCGCGGTGGCGCACAAGCTGGGCATCGGCACCGCGGAGACGCTGCGTAAGTGGGTGCGCC
AGGCCGAGGTCGACGCCGGCCAGCGGGCCGGGGTGAGCACGGACGAGTCGGCGGAGTTGAAGCGGCTGCGCCGGGAGAAC
GCGGAACTGCGTCGGGCGAACGAGATTCTGAAGGCGGCGTCGGCTTTCTTCGCGTTCATGCCAGCCTGA

Protein sequence :
MSRPSPYPRELRERAVRMVAEVRPNYESEYAAIGAVAHKLGIGTAETLRKWVRQAEVDAGQRAGVSTDESAELKRLRREN
AELRRANEILKAASAFFAFMPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 8e-05 52
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 8e-05 52
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 8e-05 52
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 8e-05 52
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 6e-05 51
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 6e-05 51
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 6e-05 51
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 6e-05 51
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 8e-05 51
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 0.037 50
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 0.037 50
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 0.037 50
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 0.037 50
unnamed AAF09023.1 unknown Not tested SHI-O Protein 0.041 50
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 0.003 50
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 0.041 50
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 0.003 50
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 0.025 50
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 0.003 50
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 0.025 50
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 3.3 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_0856 YP_004080551.1 transposase is3/is911 family protein VFG0643 Protein 0.011 50