Gene Information

Name : ML5_5403 (ML5_5403)
Accession : YP_004085023.1
Strain : Micromonospora sp. L5
Genome accession: NC_014815
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5841246 - 5841920 bp
Length : 675 bp
Strand : -
Note : KEGG: stp:Strop_2570 response regulator receiver; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein

DNA sequence : 
ATGACGGCCGTACTGGTGATCGAGGACGACGACCGCATCCGGCTCGCGCTGCAGCTCGCCCTGGAGGAGGAGGGCTACGA
GGCGTACGGCGCGCCGACCGCCGAGGACGGCCTGCGCCGGCAGCGGGAGAAGCCGGCGGACTACGTGCTCGTCGACCTGA
TGCTGCCCGGCATGAACGGGTTCGACTGCATCCGTCAGCTGCGCCGCGACGACGACGTGCCGGTCGTGGTGATCAGCGCC
CGCGACGACACCCACGACATCGTCGCCGCGCTGGAGGCGGGCGCCGACGACTACGTGGTGAAGCCGGTCGCGATCAAGGA
GCTGTCCGCCCGGCTGCGGGCGCTGCGCCGGCGCGTACGCACGGTGGCCGGGCCGGTGCCCGCCCAGTTCTTCGGCGACC
TGGAGATCAGCGCGGAGGCCGGCGAGGTGCGGCGCTCGGGACAGCCGGTGCCTGTCACCCGCACCGAGTTCCGGCTGCTC
TGCGAGCTGGCCGAGCACGCCGGGCGGGTGCTGTCGCGCCAGCAGCTGCTCAGCCGGGTCTGGGGCTACGAGACCGGCGA
CGAGCGGCTCGTCGACGTGCACGTGGGCCGGCTGCGGCAGAAGATCGAATCCGACCCGGCCAACCCGCGCCACCTGGTCA
CGCTGCGCGGCCTCGGCTACAAGCTCCAGCGATGA

Protein sequence : 
MTAVLVIEDDDRIRLALQLALEEEGYEAYGAPTAEDGLRRQREKPADYVLVDLMLPGMNGFDCIRQLRRDDDVPVVVISA
RDDTHDIVAALEAGADDYVVKPVAIKELSARLRALRRRVRTVAGPVPAQFFGDLEISAEAGEVRRSGQPVPVTRTEFRLL
CELAEHAGRVLSRQQLLSRVWGYETGDERLVDVHVGRLRQKIESDPANPRHLVTLRGLGYKLQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_5403 YP_004085023.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 3e-32 44
ML5_5403 YP_004085023.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 2e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_5403 YP_004085023.1 winged helix family two component transcriptional regulator VFG1389 Protein 7e-25 44
ML5_5403 YP_004085023.1 winged helix family two component transcriptional regulator VFG1390 Protein 7e-24 42
ML5_5403 YP_004085023.1 winged helix family two component transcriptional regulator VFG1702 Protein 6e-19 41