Gene Information

Name : ML5_3193 (ML5_3193)
Accession : YP_004082860.1
Strain : Micromonospora sp. L5
Genome accession: NC_014815
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3348155 - 3348835 bp
Length : 681 bp
Strand : +
Note : KEGG: fra:Francci3_0812 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGCCCGATGATCGAGGCCCGGGACGTCACGTACGCGTTCGGCGAGACACCCGCCCTGCGCGGCGCGAGCCTCGCCGT
GTCGGCCGGTGAGGTCGTCGCCGTGATGGGACCGAGCGGCTCCGGCAAGTCGACGCTGCTGCACTGCCTGGCCGGCATCC
TGCGCCCCGACTCCGGCGAGGTCCGGTTCGACGGCACCCGGATCGACACCCTCGGCGAGGCCGACCGCAGCACGCTGCGC
CGCGACAGCTTCGGCTTCGTCTTCCAGTTCGGGCAGCTCGTGCCGGAACTCACCGCGGCGGAGAACGTGGCGTTGCCACT
GCTGCTGCGCGGCGTCCGCCGCACTCCGGCGCTGCGCGCCGCCCGGGGCTGGTTCGAGCGGCTCGGCCTGGCCGGCCTGG
AGCACCGCCGGTCCGGCGAACTGTCCGGCGGGCAGGCCCAGCGGGTCGCGCTGGCCCGCGGTCTGGTCGCCGAGCCCCGT
GTGCTGTTCGCCGACGAGCCCACCGGCGCGCTCGACTCGCTCACCGGCGAGGAGGTGATGACGCTGCTCGTGGACGCCGC
CCGCGAGCGTGGCACCACTGTCGTCCTGGTGACGCACGAGGCGCGCATCGCCGCGTACGCCGACCGCGAGGTCATGGTGC
GCGACGGCCGGGTCAACGCCCCTGCCGGGGTCGCCTCGTGA

Protein sequence : 
MSPMIEARDVTYAFGETPALRGASLAVSAGEVVAVMGPSGSGKSTLLHCLAGILRPDSGEVRFDGTRIDTLGEADRSTLR
RDSFGFVFQFGQLVPELTAAENVALPLLLRGVRRTPALRAARGWFERLGLAGLEHRRSGELSGGQAQRVALARGLVAEPR
VLFADEPTGALDSLTGEEVMTLLVDAARERGTTVVLVTHEARIAAYADREVMVRDGRVNAPAGVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-36 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_3193 YP_004082860.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-34 50
ML5_3193 YP_004082860.1 ABC transporter-like protein NC_012469.1.7686878. Protein 9e-40 43
ML5_3193 YP_004082860.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-29 41
ML5_3193 YP_004082860.1 ABC transporter-like protein NC_012469.1.7685735. Protein 7e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_3193 YP_004082860.1 ABC transporter-like protein VFG2059 Protein 1e-20 44