Gene Information

Name : ML5_2646 (ML5_2646)
Accession : YP_004082319.1
Strain : Micromonospora sp. L5
Genome accession: NC_014815
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2769299 - 2771836 bp
Length : 2538 bp
Strand : +
Note : KEGG: saq:Sare_4709 ATPase; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGTTCGAGCGGTTCACCGACCGAGCGCGACGGGTTGTCGTCCTGGCCCAAGAAGAGGCCCGGATGCTCAACCACAACTA
CATCGGTACGGAACACATCCTGCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCGGCCAAGGCCCTGGAGAGCCTCGGCA
TCTCCCTGGAGGGCGTGCGCCAGCAGGTCGAGGAGATCATCGGCCAGGGCCAGCAGGCGCCGAGCGGGCACATCCCGTTC
ACGCCGCGGGCCAAGAAGGTGCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTGGTGAAGCTGGGCGCCGACCTGAACCGGG
TGCGCCAGCAGGTCATCCAGCTGCTCTCCGGCTACCAGGGCAAGGAGCCGGCCGCTGCCGGTGCCGCCCCGGGTGAGGCC
GCGCCGTCGACCAGCCTCGTGCTGGACCAGTTCGGCCGCAACCTGACCCAGGCCGCCCGCGAGGGCAAGCTCGACCCGGT
CATCGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTGCTGATCGGTG
AGCCCGGCGTCGGCAAGACCGCCGTGGTGGAGGGCCTGTCCCAGAAGATCATCAAGGGCGAGGTGCCCGAGACGCTGAAG
GACAAGCAGCTCTACACCCTCGACCTCGGTGCCCTGGTCGCCGGTTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAA
GAAGGTGCTCAAGGAGATCCGTACGCGCGGCGACATCATCCTGTTCATCGACGAGATCCACACCCTCGTCGGTGCGGGCG
CGGCCGAGGGCGCGATCGACGCCGCCAGCATCCTCAAGCCGATGCTGGCCCGTGGTGAGCTGCAGACCATCGGCGCCACC
ACGCTCGACGAGTACCGCAAGCACCTGGAGAAGGACGCCGCTCTGGAGCGTCGTTTCCAGCCGATCCAGGTGGGTGAGCC
GTCGCTGGCCCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGCGTCTCCATCACCGACG
CCGCGCTGGTCGCCGCCGCCACGCTCGCCGACCGGTACATCTCCGACCGGTTCCTGCCGGACAAGGCGATCGACCTGATC
GACGAGGCGGGCGCGCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGACTTCGACGAGCGCATCGCCCA
GGTGCGCCGCGACAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGCGGGCCGCCCAGCTGCGCGACACCGAGAAGCAGC
TGCTGGGGCAGAAGGCTCAGCGGGAGAAGGAGTGGAAGGCCGGTGACCTGGACGTCGTCAGCGAGGTCGACGACGAGCAG
ATCGCCGAGGTGCTCGGCAACTGGACCGGTATCCCGGTCTACAAGCTGACCGAGGAGGAGACCTCGCGCCTGCTGCGCAT
GGAGGACGAGCTGCACAAGCGCGTCATCGGCCAGGAGGACGCGGTCAAGGCCGTCTCGAAGGCGATCCGGCGTACCCGCG
CCGGCCTGAAGGACCCGAAGCGCCCCTCCGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCC
AAGGCGCTGGCCGAGTTCCTGTTCGGCAGCGAGGACGCCCTCATCCAGCTGGACATGTCGGAGTTCCACGACCGGTACAC
GGTGTCCCGGCTCGTCGGTGCCCCTCCCGGCTACGTCGGCTACGACGAGGGCGGGCAGCTGACCGAGAAGGTGCGTCGCC
GGCCGTTCTCGGTGGTCCTCTTCGACGAGATCGAGAAGGCCCACCCGGACGTGTTCAACACGCTCCTCCAGATCCTGGAG
GACGGGCGCCTCACCGACGGCCAGGGCCGGATCGTGGACTTCAAGAACACGGTCATCATCCTGACCACCAACCTCGGTAC
GCGTGACGTCGCCAAGGCGGTGTCGCTGGGCTTCCAGGCCTCTGAGGACTCCGAGTCGAACTACGACCGGATGAAGCAGA
AGGTCAACGACGAGCTCAAGCAGCACTTCCGGCCCGAGTTCCTGAACCGGATCGACGACACCATCGTCTTCCACCAGCTG
CGTCAGCTGGAGATCCTGTCGATCGTCGACATCATGATCGCCCGGATCGAGACCCAGCTGCGGAACAAGGACATGGGTCT
GGAGCTGACCGACAACGCGAAGAAGTACCTCGCGAAGAAGGGCTTCGACCCGGTGCTGGGTGCGCGGCCGCTGCGCCGCA
CGATCCAGCGCGACATCGAGGACAACCTGTCCGAGCGGATCCTCTTCAACGAGCTGACCCCGGGTCAGATCGTGGTCGTG
GACTGCGAGGGCGACCCGGAGGACATCGACAAGTCCAAGCTCGTCTTCCGGGGCGCGGACCGGCCGGACGCCGTGCCGGA
CGCGGTCCCGGCGGACCTCGGCGGCACCGCCGCCACCGGCGCGGACGACGCCGCATAA

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPAAAGAAPGEA
APSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQKIIKGEVPETLK
DKQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT
TLDEYRKHLEKDAALERRFQPIQVGEPSLAHTIEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLI
DEAGARMRIRRMTAPPDLRDFDERIAQVRRDKESAIDAQDFERAAQLRDTEKQLLGQKAQREKEWKAGDLDVVSEVDDEQ
IAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS
KALAEFLFGSEDALIQLDMSEFHDRYTVSRLVGAPPGYVGYDEGGQLTEKVRRRPFSVVLFDEIEKAHPDVFNTLLQILE
DGRLTDGQGRIVDFKNTVIILTTNLGTRDVAKAVSLGFQASEDSESNYDRMKQKVNDELKQHFRPEFLNRIDDTIVFHQL
RQLEILSIVDIMIARIETQLRNKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRDIEDNLSERILFNELTPGQIVVV
DCEGDPEDIDKSKLVFRGADRPDAVPDAVPADLGGTAATGADDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_2646 YP_004082319.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 0.0 60
ML5_2646 YP_004082319.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 1e-146 51