Gene Information

Name : ML5_2644 (ML5_2644)
Accession : YP_004082317.1
Strain : Micromonospora sp. L5
Genome accession: NC_014815
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 2766802 - 2768310 bp
Length : 1509 bp
Strand : +
Note : TIGRFAM: lysyl-tRNA synthetase; KEGG: saq:Sare_4711 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type

DNA sequence :
GTGACCGAGCAGAACGCCCTGCCAACAGACCCCGCCGACGACCTTCCCGAGCAGATGAAGGTCCGCCGGGAGAAGCGGGA
CCGGATGCTCGCCGAGGGCGTCGAGCCGTACCCGGTGGGTTTCCCGCGGACCACCACGCTCGCGCAGCTGCGGGAGCGCT
ACGGCGACCTGCCCACCGACACCGCCACCGGCGACCGGGTCTCGGTCACCGGCCGGGTGATCTTCATTCGCAACACCGGC
AAGCTCTGCTTCGCGACGCTGCGGGACGGTGACGGCACCGAGGTCCAGGCGATGCTCTCGCTGGACCGGGTCGGCGCCGA
GCGGCTGGGGGACTGGAAGCGTCTGGTCGACCTCGGCGACCACGTGGGCGTGACCGGCGAGGTGATCACCAGCCGGCGCG
GCGAGCTGTCCGTTCTCGCCGAGGAGTGGGCGGTGACCGCCAAGGCGCTGCGCCCGCTGCCGGTGGCGCACAAGCCGCTC
AGCGAGGAGTCCCGGGTCCGCCAGCGCTACGTGGACCTGGTGGTCCGCCCGCAGGCCCGGCAGATGGTCCGCACCCGGGC
CACCGCCGTCCGCAGTCTGCGCGACACCCTGCACGGGCAGGACTTCATCGAGGTCGAGACGCCGATGCTGCAACTGCTGC
ACGGCGGCGCGGCGGCCCGCCCATTCGTGACCCACAGCAATGCGCTCGACACGGATCTGTATCTGCGAATCGCGCCGGAA
CTGTTTCTCAAGCGTGCGGTGGTCGGTGGCGTGGACCGCGTCTTCGAGATCAACCGCAACTTCCGTAATGAGGGCATCGA
CTCTTCGCACTCGCCCGAGTTCGCGATGCTGGAGGCGTACCAGGCGTACGGCGACTACCACACGATGGCCGAGCTGACCC
GAAATCTCGTACAGCAGGCCGCAGTGGCGGTCGCCGGCTCCACGGTGGTGACCCACGCCGACGGGCGTGAGTTCGATCTG
GGCGGCGAGTGGCGGTCGGTGACGCTGTTCGGTGTTCTTTCCGAAGCGCTCGGTGAGGAGGTCACCGTCCGCACCGAAAG
GGCACGCCTGGTCGAGTACGCGGACAAGGTCGGTCTCTCCGTCGACCCGAAGTGGGGACCGGGCAAGCTGGCCGAGGAGT
TGTTCGAGGAACTGGTCGTGCCTTCCCTTCGGGCGCCGACGTTCGTCATGGACTACCCGGAGGAGACCAGCCCGTTGACC
CGGGCCCACCGCAGCGAGCCGGGCCTGGCCGAGAAGTGGGACCTCTACGTGCTCGGATTCGAGCTGGGCACCGCGTACTC
GGAGCTGGTCGACCCGGTCGTGCAGCGGGAACGGCTGGTGGCCCAGGCGCAGCTCGCGGCGCGCGGCGACGACGAGGCGA
TGCGGCTGGACGAGGACTTTCTCCGGGCCATGGAGTACGGAATGCCGCCGTCCGGCGGCATGGGAATGGGAATCGACCGG
CTGCTGATGGCACTGACGGGGCTCGGAATTCGGGAAACGATCCTGTTCCCGTTGGTCCGGCCCGAGTAG

Protein sequence :
MTEQNALPTDPADDLPEQMKVRREKRDRMLAEGVEPYPVGFPRTTTLAQLRERYGDLPTDTATGDRVSVTGRVIFIRNTG
KLCFATLRDGDGTEVQAMLSLDRVGAERLGDWKRLVDLGDHVGVTGEVITSRRGELSVLAEEWAVTAKALRPLPVAHKPL
SEESRVRQRYVDLVVRPQARQMVRTRATAVRSLRDTLHGQDFIEVETPMLQLLHGGAAARPFVTHSNALDTDLYLRIAPE
LFLKRAVVGGVDRVFEINRNFRNEGIDSSHSPEFAMLEAYQAYGDYHTMAELTRNLVQQAAVAVAGSTVVTHADGREFDL
GGEWRSVTLFGVLSEALGEEVTVRTERARLVEYADKVGLSVDPKWGPGKLAEELFEELVVPSLRAPTFVMDYPEETSPLT
RAHRSEPGLAEKWDLYVLGFELGTAYSELVDPVVQRERLVAQAQLAARGDDEAMRLDEDFLRAMEYGMPPSGGMGMGIDR
LLMALTGLGIRETILFPLVRPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 8e-138 59
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 6e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_2644 YP_004082317.1 lysyl-tRNA synthetase VFG1668 Protein 3e-74 41