Gene Information

Name : ML5_2468 (ML5_2468)
Accession : YP_004082141.1
Strain : Micromonospora sp. L5
Genome accession: NC_014815
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein ribd
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 2566528 - 2567589 bp
Length : 1062 bp
Strand : +
Note : KEGG: stp:Strop_1874 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGGCGAGCGTCTCCGTCGACGAGGCGATGCGTCGTGCCATCGAACTGGCCGCGCGGGGCCTCGGCGCCACGAGCCCCAA
CCCGGTGGTCGGCTGCGTGCTGCTCGACACCGACGGCGAGGTCGTCGGCGAGGGCTTCCACGCGTACGCCGGCGGCCCGC
ACGCGGAGATCGTCGCGCTGGCCCAGGCCGGCACGCGGGCCCGCGGCGGCACCGCGGTGGTCACCCTGGAACCCTGCGAC
CACACCGGCCGCACCGGCCCGTGCAGCCACGCGCTCATCGCCGCCGGGGTGTCCCGCGTGGTGATCGCCGTGCCCGACCC
CAACCCGGTCGCCTCCGGCGGCGCCGCCACGCTGCGCGCCGCGGGGGTCCAGGTCGCCCTGGGGGTACGCGCGCAGGAGG
CCGAGGCCGGCAACGTCGCCTGGCTCACCTCGATGCGCCGCGGCTGGCCGTACGTGATCTGGAAGTACGCGGCCACGCTC
GACGGGCGTTCCGCCGCCGCCGACGGCACCAGCATGTGGATCACCTCCGAGGCGGCCCGGATCGACGTGCACGCGCTGCG
CGGCACCGTCGACGCGGTGCTCGCCGGGGTGGGCACCGTGCTCACCGACGACCCCCGGCTGACCGCCCGCAACCTGCGCG
ACGGCACCATGGCCATCCGGCAGCCGCTGCGGGTGGTGGTGGACAGCTCGGGGCGTACCCCGGCCGACGCCCGGGTCCGC
GACGGCGCCGCCCGCACGTGGATCGCCACCGCCGCGGAGGTCGGCGCCGGGCCGGACGGCCGGGTCGACCTGCCGGCGCT
GCTCGCGGAGCTGCACCACCGGGGCGTGCGGGCCGCGCTGCTGGAGGGCGGGCCGACGCTGGCCGGCGCGTTCCTCGCCG
CCGGCCTGGTCGACAGGATCGTCGGGTACGTCGCGCCGAAGCTGCTCGGCGCCGGCCCGACCGCGCTGCTCGACGCGGGC
GTGAGCACCATCGCCGACGCCATCGATCTGGAGATCACCGACGTTACGCGGGTCGGTCCCGACCTGCGGATCACCGCGCT
GCCCCGGAAGAGGGAGGGCTGA

Protein sequence :
MASVSVDEAMRRAIELAARGLGATSPNPVVGCVLLDTDGEVVGEGFHAYAGGPHAEIVALAQAGTRARGGTAVVTLEPCD
HTGRTGPCSHALIAAGVSRVVIAVPDPNPVASGGAATLRAAGVQVALGVRAQEAEAGNVAWLTSMRRGWPYVIWKYAATL
DGRSAAADGTSMWITSEAARIDVHALRGTVDAVLAGVGTVLTDDPRLTARNLRDGTMAIRQPLRVVVDSSGRTPADARVR
DGAARTWIATAAEVGAGPDGRVDLPALLAELHHRGVRAALLEGGPTLAGAFLAAGLVDRIVGYVAPKLLGAGPTALLDAG
VSTIADAIDLEITDVTRVGPDLRITALPRKREG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-53 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-53 43