Gene Information

Name : ML5_2267 (ML5_2267)
Accession : YP_004081941.1
Strain : Micromonospora sp. L5
Genome accession: NC_014815
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2359099 - 2360001 bp
Length : 903 bp
Strand : +
Note : KEGG: amd:AMED_5037 ATPase component of ABC-type cobalamin/Fe3+-siderophore transport system; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGACCGCGCTGCTGTCCACCCGCGACCTGGTCGTCGGCTACGAGGGCCGCACCGTGCTGGACGGACTCGACCTCGACCT
GCCGGCCGACACGTTCACCGTGATCGTCGGCCCGAACGCCTGCGGCAAGTCGACGCTGCTGCGCACGATGGCCCGGCTGC
TCACGCCCCGGCGCGGCGCGGTGCTGCTCGACGGCGCGGCGATCCGCGAGCTGCCGACCCGGGACGTGGCCCGGCGGCTC
GGCGTCCTGCCGCAGAGCCCGCTGGTGCCCGAGGGGATCACCGTGGCCGACCTGGTCGGGCGCGGCCGGCAGCCGTACCA
GCGCTGGTGGCGGCAGTGGTCGGCCGAGGACGGGCGGGCGGTCGAGGAGGCCATGCGGCTGGCCGACGTCAGCGCGCTCG
CCGACCGCCCGGTGGACACGCTCTCCGGCGGGCAGCGCCAGCGGGTGTGGATCGCCATGACGCTGGCCCAGGACACCGAC
GCGCTGCTGCTGGACGAGCCGACCACGTTCCTCGACCTGGCCCACCAGGTCGAGGTGCTGGACCTGCTGCACCGGCTGCG
CGCCGAACGCGGCCGGACAGTGGTGGCCGTGCTGCACGACCTCAACCAGGCGGCCCGGTACGCCGACCATCTGATCGCCA
TGCGCGACGGCGCGGTGGTGGCCGCCGGCGAGCCGCGCGAGATCCTCACCGCGGACCTGGTCCGCGACGTGTTCGGGCTG
GACTGCGTGGTCGTGCCCTGCCCGGTCAGCGGCGCCCCGCTCGTGGTGCCCGCCCTCACCCAGGCCGGATCCGCCCAGAC
CGGATCCGCCCAGACCGGATCCGCCCAGGCCGGATCCGCCCAGACCTCGGCCGTTCCGGCCGTCACGCCGGCTCCGGCCG
GCGCCCCCGTCGGCGACGCCTGA

Protein sequence : 
MTALLSTRDLVVGYEGRTVLDGLDLDLPADTFTVIVGPNACGKSTLLRTMARLLTPRRGAVLLDGAAIRELPTRDVARRL
GVLPQSPLVPEGITVADLVGRGRQPYQRWWRQWSAEDGRAVEEAMRLADVSALADRPVDTLSGGQRQRVWIAMTLAQDTD
ALLLDEPTTFLDLAHQVEVLDLLHRLRAERGRTVVAVLHDLNQAARYADHLIAMRDGAVVAAGEPREILTADLVRDVFGL
DCVVVPCPVSGAPLVVPALTQAGSAQTGSAQTGSAQAGSAQTSAVPAVTPAPAGAPVGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-65 53
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-57 51
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-57 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-57 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-57 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-52 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-56 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-56 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-43 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-31 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_2267 YP_004081941.1 ABC transporter-like protein BAC0164 Protein 3e-52 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_2267 YP_004081941.1 ABC transporter-like protein VFG0925 Protein 2e-61 54
ML5_2267 YP_004081941.1 ABC transporter-like protein VFG1042 Protein 2e-52 50