Gene Information

Name : ML5_1875 (ML5_1875)
Accession : YP_004081555.1
Strain : Micromonospora sp. L5
Genome accession: NC_014815
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1928375 - 1929043 bp
Length : 669 bp
Strand : +
Note : KEGG: saq:Sare_1458 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein

DNA sequence : 
ATGCGGGTACTGGTGGTCGAGGACGAGCGCAACCTCGCCGACGCGATCGCGCGCGGGCTGCGCAAGCGCGGGATGGCTGT
CGACGTCGCCTACGACGGCGACGCCGGGCACGAGGCGGCGTTCGTCACCCGCTACGACGTGGTGATCCTGGACCGCGACC
TGCCCGGCGTGCACGGCGACCGGATCTGCGCCGACCTGGCCGCCTCCGGCGCGCTGACCCGGGTGCTGATGCTGACCGCC
AGCGTCACGGTCGCCGACCGGGTCGAGGGGTTGCAGCTCGGCGCCGACGACTACCTGGCCAAGCCGTTCGCGTTCGACGA
GCTGGTGGCCCGGGTGCAGGCGCTCGGCCGCCGCGCCACCCCGGCCGCGCCGCCGGTGCTGGAGGTGGCCGATCTGGTGC
TCGACCCGGCCCGCCGGGTGGTGAGCCGGGGCGGCGTGCCGCTCGACCTCACCAACAAGGAGTTCGGCGTGCTCGCCGAG
CTGCTCAAGGCGCGCGGCGCGGTGGTGTCCAGCGAGGAGCTGCTGGAGCGGGTCTGGGACGCCAACACCGACCCGTTCAC
CACGATCGTCCGCGTCACCGTGATGACACTGCGCAAGAAGCTCGGCGACCCGCCTCTCATCGACACCGTCGTGGGCGCGG
GCTACCGCATCGGCGGGGTACGGCAGTGA

Protein sequence : 
MRVLVVEDERNLADAIARGLRKRGMAVDVAYDGDAGHEAAFVTRYDVVILDRDLPGVHGDRICADLAASGALTRVLMLTA
SVTVADRVEGLQLGADDYLAKPFAFDELVARVQALGRRATPAAPPVLEVADLVLDPARRVVSRGGVPLDLTNKEFGVLAE
LLKARGAVVSSEELLERVWDANTDPFTTIVRVTVMTLRKKLGDPPLIDTVVGAGYRIGGVRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_1875 YP_004081555.1 winged helix family two component transcriptional regulator Y16952.3.orf35.gene. Protein 9e-45 54
ML5_1875 YP_004081555.1 winged helix family two component transcriptional regulator U82965.2.orf14.gene. Protein 1e-48 53
ML5_1875 YP_004081555.1 winged helix family two component transcriptional regulator BAC0125 Protein 9e-33 46
ML5_1875 YP_004081555.1 winged helix family two component transcriptional regulator BAC0308 Protein 5e-32 45
ML5_1875 YP_004081555.1 winged helix family two component transcriptional regulator BAC0638 Protein 1e-25 43
ML5_1875 YP_004081555.1 winged helix family two component transcriptional regulator BAC0111 Protein 2e-34 42
ML5_1875 YP_004081555.1 winged helix family two component transcriptional regulator BAC0197 Protein 3e-30 42
ML5_1875 YP_004081555.1 winged helix family two component transcriptional regulator BAC0347 Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ML5_1875 YP_004081555.1 winged helix family two component transcriptional regulator VFG0596 Protein 4e-28 41