Gene Information

Name : Mspyr1_04850 (Mspyr1_04850)
Accession : YP_004075030.1
Strain : Mycobacterium gilvum Spyr1
Genome accession: NC_014814
Putative virulence/resistance : Unknown
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 502442 - 503776 bp
Length : 1335 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence :
ATGCGTTGCACCGTCTTCGGAACCGGCTACCTCGGCGCCACCCATGCGGCCGGTATGGCCGAGCTCGGCCACGAGGTCGT
GGGTGTGGACATCGACCCCGGCAAGGTCGCCAAACTGGCTGCCGGCGAGGTCCCGTTCTACGAGCCGGGACTCCGAGAGG
CGTTGCAGCGCAACATCGAAGCGGGGCGACTGCGCTTCACCACCGACTACGCCGAGGCGGCCGAATTCGCCGATGTGCAT
TTCCTCGGGGTCGGGACACCGCAGAAGAAGGGCGAGTACGCCGCCGATCTGCGGCATGTGTACGCCGTGATCGACACGCT
GGTGCCGCTGCTGCGCCGGCCGGCGGTCATCGTCGGCAAATCGACCGTGCCGGTGGGCACGGCCGCCGAACTGGTCGAGC
GGGCCGCGGGCCTCGCTCCGGACGGGGTCACCGTCGAGGTGGCATGGAATCCGGAGTTCCTGCGGGAAGGTTTCGCCGTC
CAGGACACGTTGCATCCCGACCGCATTGTGCTTGGGGTGCAGAAGGATTCCCGGATCGCCGAGCCGGTGCTGCGTGAGTT
GTATGCGGCACTGCTCGCCGACGGGGTGCCCTTCCTGGTGTCGGACTTGCAGACCGCAGAGCTGGCCAAGGTGTCGGCGA
ACGCGTTTCTGGCCACCAAGATCTCGTTCATCAACGCGATCTCAGAGGTGTGCGAAGCCGTCGGCGCCGATGTGACGCTG
CTGGCCGATGCCCTCGGTCACGACGCCCGCATCGGCCGGCGATTCCTCAACGCGGGCCTGGGTTTCGGCGGCGGGTGCCT
GCCCAAGGACATCAGGGCGTTCATGGCCCGCGCCGGAGAGCTCGGTGCCAACCAGGCGCTGACCTTCCTGCGCGAGGTCG
ACAGCATCAACATGCGCCGGCGTACCCGGATGGTCGAGCTGGCCACCACGGCGTGCGGCGGTTCGCTGCTGGGCGCGAAC
ATCGCCGTGTTGGGCGCGGCGTTCAAACCGGAATCCGACGACGTGCGCGACTCGCCCGCGCTCAACGTCGCAGGGATGCT
GCAGCTGCACGGCGCGACCGTCAACGTCTACGACCCTAAGGCGATGGACAACTCGCGTCGGCTCTTCCCGACCCTGAACT
ACTCCGCATCGGCGTTGGACGCCTGTGAGCGCGCCGACGCGGTCCTGGTGCTCACCGAATGGAGCGAGTTCGTCGGCATG
CACCCCGACGAACTGTCGGCGGCTGTGCGGACGAAAGTGATTGTCGACGGCCGCAATTGCCTCGACATCGGGGTGTGGCG
GGACGCGGGCTGGCAGGTGCACGCACTCGGGCGCACCGTCGAGGTGGGCGCGTAA

Protein sequence :
MRCTVFGTGYLGATHAAGMAELGHEVVGVDIDPGKVAKLAAGEVPFYEPGLREALQRNIEAGRLRFTTDYAEAAEFADVH
FLGVGTPQKKGEYAADLRHVYAVIDTLVPLLRRPAVIVGKSTVPVGTAAELVERAAGLAPDGVTVEVAWNPEFLREGFAV
QDTLHPDRIVLGVQKDSRIAEPVLRELYAALLADGVPFLVSDLQTAELAKVSANAFLATKISFINAISEVCEAVGADVTL
LADALGHDARIGRRFLNAGLGFGGGCLPKDIRAFMARAGELGANQALTFLREVDSINMRRRTRMVELATTACGGSLLGAN
IAVLGAAFKPESDDVRDSPALNVAGMLQLHGATVNVYDPKAMDNSRRLFPTLNYSASALDACERADAVLVLTEWSEFVGM
HPDELSAAVRTKVIVDGRNCLDIGVWRDAGWQVHALGRTVEVGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 1e-82 53
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 1e-82 53
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 1e-82 53