Gene Information

Name : Mspyr1_41300 (Mspyr1_41300)
Accession : YP_004078539.1
Strain : Mycobacterium gilvum Spyr1
Genome accession: NC_014814
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 4277977 - 4279332 bp
Length : 1356 bp
Strand : +
Note : PFAM: transposase, Mutator family

DNA sequence :
ATGGCTACTGGCAAGGATGAGGATTTGCAGCTGGATCAGGTGGTCTCCACCCGGGAGATGGCCGAGGCGCTTCGGGCTTC
GGGAGCTGTGGACGATTTGCTGGCCCAGATCGACACCGGTGAGGTGGCGCTGACCGGCGAGGGCGGCTTACTGCCCGGGC
TGATCAAGCTCGCTCTCGAGCGGGGACTGGCCGCGGAGTTGACCGATCATCTGGGCTACGAAAAGGGCGAGCCGGCTGGG
CGGGGGTTGCCCAATGCCCGCAACGGCAGCTCGGCCAAGACGGTGCAGACCGAGGCCGGCCCGGTGCCGTTGGACGTCCC
CCGCGATCGTGAGGGCTCGTTCACCCCGCGGCTGGTGCCCAAGGGCCAGCGCCGCATCGGCGGCCTCGACGACATGATCG
TCTCGCTGTATGCCGGTGGAATGACATTGCGCGACATACAGTTTCATCTTCAGTCGACGATCGGTACCGAGGTTTCACAC
GAGACGATCTCCAAGATCGTCGATGAGATCTCCGAGGCCGTGCTGTCCTGGCAGCATCGCCCCCTGGACGCGCTGTATCC
GGTGATTTACCTCGACGCGATCGTGGTCAAGGTCAAAGACGGCGGCCACACCCGCAACAAGGCCGCTCACATCGCCGTAG
GCGTCGATATGGCTGGGATTAAGCACGTCCTGGGCATCTGGGTCCAGCAGAACGAGGGCGCCTCGTTTTGGGCGTCGGTG
TGTGCTGATCTGGCCAATCGAGGGGTGCGCGACGTGCTGATCGTGTGCTGCGACGGGCTGACAGGATTCCCCGAGGCGAT
CGCGGCCACCTGGTCACAGGCCGCTATTCAGACCTGTGTGGTGCACTTGATCCGCAACGCGTTGCGGTTCGTGTCCTACA
GCGACCGCAAGACGGTGGCTGCAGCACTCAAGCCGATCTACACCGCACCCAACGCCGAAGCCGCCCGCGCCGAGCTCGAC
GCGTTCACCGCATCGGAGATGGGCAAGAAAAACCCAACGGTGACAAGGGTTTTCGACCGTGCGTGGGAACAGTTCACGCC
GTTCTTGGCGTTTCCGCCAGAGCTACGCCGGGTGATCTACACGACGAACTCGATCGAATCGCTGAACTACCAGTTACGCA
AGGTCACCAAGACTCGTGGCCAGTTCCCCAACGACGCGGCCGTGGTGAAACTGCTCTGGCTGGCCATCTGCAACATCGAG
GACAAACGCGCCGCCGAACGAGCCAAAGAACGCGGCCAGAAACGTTGCCGAACAGCCCCCGGACGCCTCGTGGAAGGACA
GGTCGTCACCAACTGGAAGAAAGCCCTCGAACAACTCGCGCTGGTCTACCCAGACCGCGTAGAACCCTATCTGTAA

Protein sequence :
MATGKDEDLQLDQVVSTREMAEALRASGAVDDLLAQIDTGEVALTGEGGLLPGLIKLALERGLAAELTDHLGYEKGEPAG
RGLPNARNGSSAKTVQTEAGPVPLDVPRDREGSFTPRLVPKGQRRIGGLDDMIVSLYAGGMTLRDIQFHLQSTIGTEVSH
ETISKIVDEISEAVLSWQHRPLDALYPVIYLDAIVVKVKDGGHTRNKAAHIAVGVDMAGIKHVLGIWVQQNEGASFWASV
CADLANRGVRDVLIVCCDGLTGFPEAIAATWSQAAIQTCVVHLIRNALRFVSYSDRKTVAAALKPIYTAPNAEAARAELD
AFTASEMGKKNPTVTRVFDRAWEQFTPFLAFPPELRRVIYTTNSIESLNYQLRKVTKTRGQFPNDAAVVKLLWLAICNIE
DKRAAERAKERGQKRCRTAPGRLVEGQVVTNWKKALEQLALVYPDRVEPYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 6e-121 55
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 3e-119 54
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 1e-124 52
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 4e-78 46