Gene Information

Name : Mspyr1_40970 (Mspyr1_40970)
Accession : YP_004078518.1
Strain : Mycobacterium gilvum Spyr1
Genome accession: NC_014814
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4254450 - 4255421 bp
Length : 972 bp
Strand : +
Note : PFAM: Integrase core domain

DNA sequence :
ATGATCGTCGCGTTCATCGACGAGCTGCGGGCCGAGGGCCATGCGGTCGAGTCGATCTGCCGAGTCCTGCGTGAGCAGGG
CCCTCAGATCGCCGCGCGGACCTACCGTGACTGGGCACGAGCCAACCGGCCTGTCGCTGACCGGACGATAACCGACGCCA
TGGTCGCCGATCAGGTCCGCGACCTGGTCTGGAAGGTCGATCACGCAGGAGTGCGGCGGATGACCCCAGAAGGTCTTTAC
GGCCGTCGGAAGATGACAGCGCTGGTGAAGCGCACCACTCCGGCCGCGTCGCCGGGCAGTGTGGACCGGGCGATGAGATT
GCTTGGCCTGCAGGGTGTCCGACGCTCAAAGGGGATTCGGACCACTATCGCGGCCAAGGACGGCACGCGCGCCGGCGATC
TCCTTGATCGGGACTTCACCGCCGAAGCGCCCAACCGCACCTGGGTCATGGACTTCACCTACGTCCGCACCTGGGTGGGA
TTCGTCTACGTCGCGTTCATCCTCGACGTGTTCGCCCAGAAGATCATCGCGTGGAACGTGGCACCCACCAAGGCCGTCGA
GCTGGTCGACGTGCCGCTCCGCATGGCCTTGTGGGCGCGCAACCGTGAGGGCCACCCCGTCGTCCGCGGAGAGCTCATCG
GTCACGCCGATGCCGGGTCGCAATACACCTCCATCACCTTCACCGACCACCTTGCCCAGGAGGGCATCCTGCCCTCGATC
GGGTCGGTAGCCGACGCGTATGACAACGCGTTGATGGAGTGCGTAATCGGGCTGTACAAGACCGAGTGCATCCGCACCAC
GATCTTTCACGGCGGCCCCTACCGCAATATCGGAGACGTCGAGTACGCCACCGCCGGCTGGGTCGACTGGTACAACAACA
GGCGCCTGCACAGCAGCCTTGAGATGATGACCCCCGTGGAGTTCGAGCAAGCCCACTACGCGACCCTCAACCGAGAGCCG
CAACCCGTATAA

Protein sequence :
MIVAFIDELRAEGHAVESICRVLREQGPQIAARTYRDWARANRPVADRTITDAMVADQVRDLVWKVDHAGVRRMTPEGLY
GRRKMTALVKRTTPAASPGSVDRAMRLLGLQGVRRSKGIRTTIAAKDGTRAGDLLDRDFTAEAPNRTWVMDFTYVRTWVG
FVYVAFILDVFAQKIIAWNVAPTKAVELVDVPLRMALWARNREGHPVVRGELIGHADAGSQYTSITFTDHLAQEGILPSI
GSVADAYDNALMECVIGLYKTECIRTTIFHGGPYRNIGDVEYATAGWVDWYNNRRLHSSLEMMTPVEFEQAHYATLNREP
QPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 5e-43 45
Z1198 NP_286733.1 transposase Not tested TAI Protein 3e-42 44
Z1638 NP_287141.1 transposase Not tested TAI Protein 3e-42 44
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 9e-43 44
Z1221 NP_286756.1 transposase Not tested TAI Protein 9e-43 44