Gene Information

Name : Mspyr1_31750 (Mspyr1_31750)
Accession : YP_004077626.1
Strain : Mycobacterium gilvum Spyr1
Genome accession: NC_014814
Putative virulence/resistance : Unknown
Product : pyridoxal phosphate synthase yaaD subunit
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 3307103 - 3308020 bp
Length : 918 bp
Strand : -
Note : PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1

DNA sequence :
GTGGAATCCGAATTGACGGGGGCGGCGTCAGGGGCTCCCGCTCGCGGAACCGCCCGGGTGAAGCGCGGCATGGCCGAGAT
GCTCAAGGGCGGCGTCATCATGGACGTGGTCACACCCGAGCAGGCGCGTATCGCCGAAGGCGCCGGTGCGGTCGCGGTGA
TGGCGCTCGAGCGCGTCCCCGCCGACATCCGCGCCCAGGGCGGGGTGTCGCGGATGAGCGACCCCGACATGATCGAGGGC
ATCATCGACGCCGTCACGATCCCGGTGATGGCCAAGGCCCGGATCGGCCACTTCGTCGAGGCCCAGATCCTGCAGAGCCT
CGGCGTGGACTACGTCGACGAGTCCGAGGTGCTCACCCCCGCCGACTACACCAACCACATCGACAAGTGGAAGTTCACCG
TGCCGTTCGTCTGCGGCGCGACCAATCTGGGCGAGGCGCTGCGCCGCATCGCCGAGGGCGCGGCGATGATCCGGTCCAAG
GGTGAGGCCGGCACCGGCGACGTCTCCAACGCGACCACCCATATGCGCAAGATCGGCGGCGAGATCCGCCGGCTGACGTC
GCTGTCGGAGGACGAGTTGTACGTTGCGGCAAAGGAATTGCAGGCCCCGTACGACCTCGTCGTCGAGGTCGCCCAGGCCG
GGAAGCTTCCGGTGACGCTGTTCACCGCGGGCGGCATCGCCACCCCCGCGGACGCCGCGATGATGATGCAGCTCGGCGCC
GAGGGGGTGTTCGTCGGCTCAGGGATCTTCAAGTCCGGCAACCCCGCCGAGCGTGCCGCCGCGATCGTCAAGGCCACCAC
GTTCTACGACGATCCCGACGTGCTGGCCAAGGTCTCGCGGGGGCTGGGCGAGGCGATGGTCGGCATCAACGTGGAGGACA
TCGCGCAGCCTCACCGGCTCGCCGAACGCGGCTGGTAA

Protein sequence :
MESELTGAASGAPARGTARVKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEG
IIDAVTIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYTNHIDKWKFTVPFVCGATNLGEALRRIAEGAAMIRSK
GEAGTGDVSNATTHMRKIGGEIRRLTSLSEDELYVAAKELQAPYDLVVEVAQAGKLPVTLFTAGGIATPADAAMMMQLGA
EGVFVGSGIFKSGNPAERAAAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEDIAQPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-115 84
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-115 84
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-115 83