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Name : Mspyr1_27810 (Mspyr1_27810) Accession : YP_004077245.1 Strain : Mycobacterium gilvum Spyr1 Genome accession: NC_014814 Putative virulence/resistance : Unknown Product : transcriptional accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2878559 - 2880922 bp Length : 2364 bp Strand : - Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region DNA sequence : GTGATCACGTCCGGCGCAGTCAAGTCTGGCCCAGCCAAATCCGACGCAGTGAAATCCGTAACCGCCCGTCTCGCTGAGGA ACTGGCTGTCGCCGAAGCCCAGGTCGCGGCCGCAGTGCGACTGCTCGACGAGGGCGCCACGGTGCCGTTCATCGCCCGCT ACCGCAAAGAGGTCACCGGCAGCCTGGACGACGGTCAGCTCCGGACACTCGAGGAACGGCTCGGCTATCTGCGCGAGCTC GACGACCGGCGCAACGCGGTGCTCGCCTCGATCAACGAGCAGGGCAAGCTCACCACCGAGCTCACCGCGGCGCTGATGGC CGCCGACACCAAGGCCAGGGTCGAGGACATCTACCTGCCGTACAAGCCGAAGCGGCGGACCAAGGCGCAGATCGCCCGGG AGGCGGGGCTGCAACCGCTGGCCGAACGCCTGCTGGCCGACCCGTCCGTGGTGCCCGAGGAGGCGGCGGCCGAGTTCACC TCCGCCGAGGTCGCCGACACCGCCGCGGCCCTCGACGGCGCACGGCACATCGTCGTCGAACGGGCCGCCGAAGACGCCGA GCTGGTCGGCGCCCTGCGCGAGCGGTTCTGGGAGAACGCGTCGGCGCGCACCCGGCCGGCGTCCGACGCCGCCGCGGCCT CGGAGAAGGGGCAAAAGTTCCGGGACTACTTCGACCACACCGAACCGCTGTCGTCGATGCCGTCGCACCGGGTGCTCGCC GTGCTGCGCGGTGAGAAGGAGCAGGTGCTGTCCCTGGCGCTCGACGGGGGAGAGGACGACACCTACCGGGCGATGATCGC GTCGGCGCTCGGTGTGGACCTGACCGCCGGAGCCGCCGCCACCCCGTGGCTGGCCGCCACCGTCGGCTTCGCGTGGCGCA CCAGGCTCTCGGTGTCGGCGTCGGTGGACGCGCGGGTGCGGCTGCGGTTGCGGGCCGAGGCCGACGCGGTGACGGTGTTC GCCAGGAACCTCAAGGACCTCCTGCTCGCGGCACCGGCCGGCAACCGGACCACCCTCGGCCTCGACCCGGGGTTCCGCAC CGGCGTCAAGGTGGCCGTCGTCGACGGCACCGGCAAGGTCCTCGACACGTGCGCGATCTACCCGCACCAACCGCAGAAGC AGTGGGACACCGCCAAGGCGACGCTCGCCGCGCTGGTCGCCCGCCACGGGGTCGAGCTGATCGCCGTGGGCAACGGAACC GCGTCGCGCGAGACGGATGCGCTCGCCACCGAACTGATCGCCGACATCCGCGGCGCGGGCGGCACCGCACCGGCCAAGGC GATGGTCAGCGAGGCCGGCGCGTCGGTGTACTCGGCCTCGGCGTACGCCGCGCACGAACTGCCCGACCTGGATGTGACGC TGCGCGGCGCCGTGTCGATCGCCCGCAGGTTGCAGGACCCGCTGGCCGAGCTGGTCAAGATCGAGCCGAAGTCGATCGGT GTCGGCCAGTACCAGCACGACGTCACCCCCGGCATCCTTGCGAAGAGCCTGGGCGCCGTCGTCGAGGACGCGGTCAACGC CGTCGGCGTCGACCTGAACACCGCGTCGGTGCCGCTGCTGTCGCGTGTCTCGGGCATCACCGAATCGCTGGCCGAGGCGA TCGTCGCGCACCGCGACCAGACGGGCCGTTTCCAGAACCGGCGCGCGCTGCTCGACGTTCCGCGGCTGGGCCCCAAGGCA TTCGAGCAGTGCGCGGGATTCCTGCGCATCCGCGACGGCGACGACCCGCTCGATGCGTCCGGCGTCCACCCGGAGTCCTA TCCGGTGGTCCGGCGCATCCTGGACCGCGCCAACGTGACGTTGACCGAGATCATCGGCGACGAGCGCGCACTGCGGGCAC TCAAGCCCGCCGACTTCGCCGACGACACGTTCGGCATCCCGACCGTCACCGACATCCTCGGCGAACTGGAGAAGCCGGGC CGCGACCCCCGGCCCGCGTTCACCACCGCGACATTCGCGGCGGGCGTCGAGAAGGTGGCCGACCTCAAGGCCGGGATGAT CCTCGAGGGTGTGGTCACCAACGTCGCCGCGTTCGGCGCGTTCGTCGACGTCGGGGTGCACCAGGACGGGCTCGTGCACG TCTCCGCGATGGCCGACCGCTACGTCTCCGATCCGCACGAGGTGGTGCGCTCGGGTCAGGTGGTCCGGGTGAAGGTCGTC GACGTCGACGTGGAACGTCAGCGCATCGGTCTGAGCATGCGGCTCAACGACGAGACCACGCCGCAGCGCGGCCCGCGCCG CAACGAACGGCCCCGCACGCCGCAGCGAAAGCAGCAGCGCCCCACCAACACCGGCGGCCGGGAGACCGGCAAGGCGGGCG GTTCCATGGCGCAGGCGCTACGGGACGCCGGCTTCGGACGATGA Protein sequence : MITSGAVKSGPAKSDAVKSVTARLAEELAVAEAQVAAAVRLLDEGATVPFIARYRKEVTGSLDDGQLRTLEERLGYLREL DDRRNAVLASINEQGKLTTELTAALMAADTKARVEDIYLPYKPKRRTKAQIAREAGLQPLAERLLADPSVVPEEAAAEFT SAEVADTAAALDGARHIVVERAAEDAELVGALRERFWENASARTRPASDAAAASEKGQKFRDYFDHTEPLSSMPSHRVLA VLRGEKEQVLSLALDGGEDDTYRAMIASALGVDLTAGAAATPWLAATVGFAWRTRLSVSASVDARVRLRLRAEADAVTVF ARNLKDLLLAAPAGNRTTLGLDPGFRTGVKVAVVDGTGKVLDTCAIYPHQPQKQWDTAKATLAALVARHGVELIAVGNGT ASRETDALATELIADIRGAGGTAPAKAMVSEAGASVYSASAYAAHELPDLDVTLRGAVSIARRLQDPLAELVKIEPKSIG VGQYQHDVTPGILAKSLGAVVEDAVNAVGVDLNTASVPLLSRVSGITESLAEAIVAHRDQTGRFQNRRALLDVPRLGPKA FEQCAGFLRIRDGDDPLDASGVHPESYPVVRRILDRANVTLTEIIGDERALRALKPADFADDTFGIPTVTDILGELEKPG RDPRPAFTTATFAAGVEKVADLKAGMILEGVVTNVAAFGAFVDVGVHQDGLVHVSAMADRYVSDPHEVVRSGQVVRVKVV DVDVERQRIGLSMRLNDETTPQRGPRRNERPRTPQRKQQRPTNTGGRETGKAGGSMAQALRDAGFGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-167 | 60 |
