Gene Information

Name : Mspyr1_24850 (Mspyr1_24850)
Accession : YP_004076960.1
Strain : Mycobacterium gilvum Spyr1
Genome accession: NC_014814
Putative virulence/resistance : Virulence
Product : ATPase component of Mn/Zn ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2569409 - 2570158 bp
Length : 750 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
GTGACGACAGCCGCACCGGCGCTTCAGGTCGAGTCCCTCACCGTGCGCTACGGGCCCGTGCTCGCACTTGACGACGCGTC
GTTCACGCTGCACCCGGGGCGGGTGTGCGGGCTGGTCGGAATGAACGGCTCCGGGAAATCCACGCTGTTCAAAGCCATCA
TGGGGTTGGTGCGCTCGGACACCGGCGATGTCCGCATCCACGACTCCTCCCCCGCGCGTGCCCGCAGAGCGGGCGTCGTC
GGGTACATGCCCCAGAGCGAGGCCATCGACTGGACCTTTCCGCTGTCGGTCCGCGACGTCGTGATGACGGGCCGCTACGG
GCACATGGGCCCTGCCCGGCGGGCGCGCCACGTCGACCGGCGCGCTGTCGACGACGCGTTGGCCCGCGTCGAGCTCTCCG
ACTTCCGCCACCGCCAGATCGGCCGACTCTCCGGTGGTCAACGCAAGCGGGCCTTCCTGGCACGCTGTCTCGCCCAGGGC
GCGGAACTCCTGCTGCTCGACGAACCCTTCGCAGGCGTCGACAAACGCAGCGAAGCCACCATCTGCCGGCTGCTGCGTGA
CCTCGCCGACAGCGGCGCAACGGTTCTCATCGCCACCCATGATCTGAACGCGCTGCCCGAGCTCGCCGACGAGGCGATCC
TGTTGATGCGGACCGTTCTCCTGCACGACCACCCCGACACCGTCCTGGATCCCCGCAATCTCGCGCGGGCCTTCGGTCTC
GACCTTCCCCGCAGCCGAGGGGGACAATGA

Protein sequence : 
MTTAAPALQVESLTVRYGPVLALDDASFTLHPGRVCGLVGMNGSGKSTLFKAIMGLVRSDTGDVRIHDSSPARARRAGVV
GYMPQSEAIDWTFPLSVRDVVMTGRYGHMGPARRARHVDRRAVDDALARVELSDFRHRQIGRLSGGQRKRAFLARCLAQG
AELLLLDEPFAGVDKRSEATICRLLRDLADSGATVLIATHDLNALPELADEAILLMRTVLLHDHPDTVLDPRNLARAFGL
DLPRSRGGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 7e-47 49
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 7e-47 49
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-48 49
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 6e-48 49
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-48 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mspyr1_24850 YP_004076960.1 ATPase component of Mn/Zn ABC transporter BAC0350 Protein 3e-48 49
Mspyr1_24850 YP_004076960.1 ATPase component of Mn/Zn ABC transporter BAC0440 Protein 4e-50 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mspyr1_24850 YP_004076960.1 ATPase component of Mn/Zn ABC transporter VFG0526 Protein 3e-48 49