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Name : Mspyr1_24840 (Mspyr1_24840) Accession : YP_004076959.1 Strain : Mycobacterium gilvum Spyr1 Genome accession: NC_014814 Putative virulence/resistance : Virulence Product : ABC-type Mn2+/Zn2+ transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 2568468 - 2569412 bp Length : 945 bp Strand : - Note : PFAM: ABC 3 transport family DNA sequence : ATGACCGTCGTCGAGTTCCTCGTCGAACCGCTGCAGCTGGAGTTCATGGTCCGCGCCACCGTCACGACGCTCATCGCGTC GACTGTGTGCGCCACGCTGTCGTGCTGGCTCGTTCTCATCGGCTGGTCGTTGATGGGAGACGCGGTATCACACGCCGTCC TTCCCGGCGTCGTGCTGGCCCACATCGTCGGTGCACCGTTTGCGTTGGGCGCCATCATTTTCGGCTTCGTCGCGGTCGGA CTCATCGGCGTCGTCCGAGACACCAGCCGCACCAAGGAAGACGCCGCCATCGGGGTCGTCTTCACGACCCTGTTCGCGCT CGGACTGGTGCTGATCTCGGTGACGCCCAGTCAGGTCGATCTCAACCACATCATCTTCGGCAACGTGCTCGGTGTCTCCC GGGCCGACCTCATCCAGGTGGCCGTCCTCGGCACCGTCGTGATGGCGGTCATGGTCTACAAACGTCGCGACTTCACCCTC TACGCCTTCGATCCCCACCACGCCCACGCGATCGGACTCAATCCCCGCCTGCTGGGCGCCGCCCTGCTCGGATTGCTCGC TCTGACCGCGGTCGTGGCGCTGCAGGCCGTGGGAGTCGTTCTCGTGGTCGCCCTGCTCATCACTCCCGGTGCGACCGCCT ACCTGATCACAGAGCGGTTCAGCCGCATGCTGCTCATCGCACCGACGATCGCCGCGGTCTGCGCACTGACCGGCCTGTAC GCGAGCTACTACCTCGACACCGCGTCCGGGCCGATGGTCGTGCTGGCCAACGGCACAGCGTTCGCGCTCGCCTACCTCGC TCGTCTCGGCCGGGAACAGCGCACCCGGCACCACCGCCCCGGCGTCAGAGCACCTTGGACAGAAACTCCTGCAGCCGAGG ATGCTTCGGATTGTCGAAGATCTCGGCGGGCGGGCCTTCCTCGACGATGTGGCCGTCGGCCATGA Protein sequence : MTVVEFLVEPLQLEFMVRATVTTLIASTVCATLSCWLVLIGWSLMGDAVSHAVLPGVVLAHIVGAPFALGAIIFGFVAVG LIGVVRDTSRTKEDAAIGVVFTTLFALGLVLISVTPSQVDLNHIIFGNVLGVSRADLIQVAVLGTVVMAVMVYKRRDFTL YAFDPHHAHAIGLNPRLLGAALLGLLALTAVVALQAVGVVLVVALLITPGATAYLITERFSRMLLIAPTIAAVCALTGLY ASYYLDTASGPMVVLANGTAFALAYLARLGREQRTRHHRPGVRAPWTETPAAEDASDCRRSRRAGLPRRCGRRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 4e-40 | 46 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 3e-40 | 46 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 2e-40 | 46 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 5e-40 | 46 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 4e-40 | 46 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 3e-38 | 41 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 5e-38 | 41 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 5e-38 | 41 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 4e-38 | 41 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 4e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mspyr1_24840 | YP_004076959.1 | ABC-type Mn2+/Zn2+ transporter permease | BAC0352 | Protein | 1e-40 | 46 |
| Mspyr1_24840 | YP_004076959.1 | ABC-type Mn2+/Zn2+ transporter permease | BAC0442 | Protein | 2e-41 | 44 |
| Mspyr1_24840 | YP_004076959.1 | ABC-type Mn2+/Zn2+ transporter permease | BAC0441 | Protein | 6e-35 | 42 |
| Mspyr1_24840 | YP_004076959.1 | ABC-type Mn2+/Zn2+ transporter permease | BAC0351 | Protein | 2e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mspyr1_24840 | YP_004076959.1 | ABC-type Mn2+/Zn2+ transporter permease | VFG0528 | Protein | 1e-40 | 46 |
| Mspyr1_24840 | YP_004076959.1 | ABC-type Mn2+/Zn2+ transporter permease | VFG0527 | Protein | 2e-38 | 41 |
