Gene Information

Name : Mspyr1_15680 (Mspyr1_15680)
Accession : YP_004076073.1
Strain : Mycobacterium gilvum Spyr1
Genome accession: NC_014814
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1585818 - 1587449 bp
Length : 1632 bp
Strand : -
Note : PFAM: Sodium:solute symporter family; TIGRFAM: transporter SSS family

DNA sequence :
ATGACCACCCTGCTGGCGCAATCCGAGACGGTCGGCAACCCGCTGGCCAACATCGGCATCTTCAGCCTGTTCGTCGTGGT
CACGATGATCGTCGTGATCCGGGCGAGCAAGCGCAACGCCACCGCCGACGAGTTCTTCACCGGCGGCCGCGGCTTCTCCG
GACCGCAGAACGGCATCGCGATCGCCGGTGACTACCTGTCGGCGGCCAGCTTCCTCGGCATCGCCGGCGCGATCGCGGTG
TACGGGTACGACGGCTTCCTGTACTCGATCGGCTTCCTGGTCGCGTGGCTGGTCGCCCTGCTGCTGGTGGCCGAATTGCT
CCGCAACACAGGACGATTCACCATGGCCGACGTGCTGAGCTTCCGGCTCAAGCAACGCCCGGTCCGGCTGGCCGCGGCCA
CCAACACCCTGACGGTGTCGCTGTTCTACCTGCTGGCCCAGATGGCCGGCGCCGGCGGCCTGGTCGCCCTGCTGCTCGAC
ATCAACAGCCGCGCAGGGCAGTCCGTCGTGATCGCCGTGGTCGGCGTGCTGATGATCGTCTACGTCCTGGTCGGCGGCAT
GAAGGGCACGACGTGGGTGCAGATCATCAAGGCCGTGCTGCTGATCGCCGGTGCCGGCTTCATGACGGTGATGGTGCTCG
CGAAGTTCGGGCTGAACTTCTCCGAGATCCTCGGCTCCGCCCAGTCGGCCATCAGCGGTGCGACCACCGCGGGCGTCGCC
GATCGTGACGTGCTGGCCCCCGGCGCGCAGTACGGCGGTTCGCTGACCTCGCAGATCAACTTCATCTCCCTGGCGCTGGC
GCTGGTGCTGGGCACCGCGGGTCTGCCGCACGTGCTGATGCGCTTCTACACGGTGCCGACCGCCAAAGAAGCCCGGCGCT
CGGTGGTGTGGGCGATCGCGTTGATCGGCGCCTTCTACCTGTTCACCCTGGTGCTCGGCTACGGAGCCGCGGCGCTGGTC
GGTCCGGACCGCATCCTCGGCGCGGCCGGCGGTGTCAACTCGGCGGCCCCGTTGCTGGCCTTCGAGCTCGGCGGCGTGAT
CCTGCTCGGCGTCATCTCCGCGGTCGCGTTCGCGACCATCCTCGCGGTGGTGGCGGGGCTGACGATCACCGCGTCGGCAT
CGTTCGCCCACGACATCTACGCGTCGGTGTTGAAGTCGCACAAGGTGACCGAGGCCGAGCAGGTGAAGGTCTCGCGGATC
ACCGCCGTCGTGCTCGGCATCCTCGCGATCGGCCTGGGCATCCTGGCCAACGGGCAGAACATCGCGTTCCTGGTGGCGCT
GGCGTTCGCGGTGGCGGCGGCGGCGAACCTGCCGACGATCATCTACTCGCTGTACTGGAAGCGGTTCAACACCCGTGGCG
CGCTGTGGAGCATGTACGGCGGTCTGATCTCGACCATCGTGCTGATCGTGTTCTCCCCGGCGGTGTCCGGATCGAAGACC
GCGATGATCCCGGGCGCGGACTTCGCGTTCTTCCCGCTGGCCAACCCCGGCATCGTGTCCATCCCGCTGGCCTTCATCCT
GGGCATCGTCGGCACGCTGACCTCACCTGACGACGAGGACCCGAAGGTCGCTGCCGAGATGGAGGTCCGCTCGCTGACCG
GCATCGGGGCCGAGAAGGCCGTGTCCCACTAG

Protein sequence :
MTTLLAQSETVGNPLANIGIFSLFVVVTMIVVIRASKRNATADEFFTGGRGFSGPQNGIAIAGDYLSAASFLGIAGAIAV
YGYDGFLYSIGFLVAWLVALLLVAELLRNTGRFTMADVLSFRLKQRPVRLAAATNTLTVSLFYLLAQMAGAGGLVALLLD
INSRAGQSVVIAVVGVLMIVYVLVGGMKGTTWVQIIKAVLLIAGAGFMTVMVLAKFGLNFSEILGSAQSAISGATTAGVA
DRDVLAPGAQYGGSLTSQINFISLALALVLGTAGLPHVLMRFYTVPTAKEARRSVVWAIALIGAFYLFTLVLGYGAAALV
GPDRILGAAGGVNSAAPLLAFELGGVILLGVISAVAFATILAVVAGLTITASASFAHDIYASVLKSHKVTEAEQVKVSRI
TAVVLGILAIGLGILANGQNIAFLVALAFAVAAAANLPTIIYSLYWKRFNTRGALWSMYGGLISTIVLIVFSPAVSGSKT
AMIPGADFAFFPLANPGIVSIPLAFILGIVGTLTSPDDEDPKVAAEMEVRSLTGIGAEKAVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 2e-109 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mspyr1_15680 YP_004076073.1 SSS sodium solute transporter BAC0564 Protein 8e-55 45
Mspyr1_15680 YP_004076073.1 SSS sodium solute transporter BAC0570 Protein 2e-46 42