Gene Information

Name : Mspyr1_54310 (Mspyr1_54310)
Accession : YP_004074425.1
Strain :
Genome accession: NC_014811
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 84740 - 85495 bp
Length : 756 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGAACTCCATGAGCAACACATCAGTGCCCTCGGGTGAGGATGCGCGAGGCTACCGGGCGCTCGTGGTCGATGACGAGGC
CGCGCTGGCTGAGGTGGTGGCCAGCTACCTGAATCGCGAGCACTTCACCACCCGCATCGTCGACAACGGTCCCGATGCTG
TGGCCGTGGCCCGCGACTTCGACCCCGACGTGGTGATCCTCGACCTCGGTCTGCCCGGTATGGACGGGTTAGAAGTGTGC
CGCCAGCTGCGCACCTTCTCCGACGCCTACGTGGTCATGCTCACCGCCCGCGACACCGAAATGGACACCATCGTGGGACT
CACTGTCGGCGCCGACGATTACGTCGCCAAACCCTTCAGCCCACGCGAACTGGTGGCACGCATCCGCGCGATGCTGCGGC
GCCCGCGCGCCACCCCCGAGCCCGAGAGCGACCGCGGCGGCGACTTACCGGCCCCGCTGTCGTTTGGGCCGTTGCGTATC
GACGTGGCGGGCCGAGAGGTGTCTCTGGATGGTGAACCGATCCTGTTGACCCGCACCGAATTTGACATACTCGCCGCCCT
GTCGGCGCGCCCGGGCGTGGTACTGAGCCGCCGCCAGTTGCTTGAGACCGTGCGCGAGGGGCCCTGGGTCGGTAACGAAC
ACCTCGTTGATGTCCATATCGGCCATGTGCGACGCAAACTTGGCGACGATCCAGCCGCACCGCGTTACGTCATCACCGTT
CGCGGCGTTGGATACCGCATGGGAAGCGGGCAGTGA

Protein sequence : 
MNSMSNTSVPSGEDARGYRALVVDDEAALAEVVASYLNREHFTTRIVDNGPDAVAVARDFDPDVVILDLGLPGMDGLEVC
RQLRTFSDAYVVMLTARDTEMDTIVGLTVGADDYVAKPFSPRELVARIRAMLRRPRATPEPESDRGGDLPAPLSFGPLRI
DVAGREVSLDGEPILLTRTEFDILAALSARPGVVLSRRQLLETVREGPWVGNEHLVDVHIGHVRRKLGDDPAAPRYVITV
RGVGYRMGSGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-27 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mspyr1_54310 YP_004074425.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 4e-33 43
Mspyr1_54310 YP_004074425.1 winged helix family two component transcriptional regulator CP000034.1.gene3671. Protein 8e-36 43
Mspyr1_54310 YP_004074425.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 7e-35 42
Mspyr1_54310 YP_004074425.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 7e-38 42
Mspyr1_54310 YP_004074425.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mspyr1_54310 YP_004074425.1 winged helix family two component transcriptional regulator VFG1386 Protein 9e-27 41
Mspyr1_54310 YP_004074425.1 winged helix family two component transcriptional regulator VFG1563 Protein 1e-27 41
Mspyr1_54310 YP_004074425.1 winged helix family two component transcriptional regulator VFG1702 Protein 2e-27 41