|
Name : ureB2 (HFELIS_13570) Accession : YP_004074031.1 Strain : Helicobacter felis ATCC 49179 Genome accession: NC_014810 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 1331010 - 1332716 bp Length : 1707 bp Strand : + Note : - DNA sequence : ATGAAAATGAAAAAACAAGAATATGTAAATACCTACGGACCCACCAAAGGCGATAAAGTGCGCTTAGGAGATACCGATCT TTGGGCAGAAGTAGAACATGACTATACCACCTATGGCGAAGAACTTAAATTTGGCGCGGGTAAAACTATCCGTGAGGGTA TGGGTCAGAGCAATAGCCCTGATGAAAACACCCTAGATTTAGTCATCACTAACGCGATGATTATCGACTACACCGGGATT TACAAAGCCGACATTGGGATTAAAAACGGCAAAATCCATGGCATTGGCAAGGCAGGAAACAAGGACATGCAAGATGGCGT AAGCCCTCATATGGTCGTGGGTGTGGGCACAGAAGCACTAGCAGGGGAAGGTATGATTATTACCGCTGGGGGAATCGATT CACACACCCACTTCCTTTCTCCACAACAATTCCCTACCGCTCTAGCCAATGGCGTTACAACCATGTTTGGAGGCGGCACA GGTCCTGTAGATGGCACGAATGCGACTACTATCACTCCGGGCAAATGGAACTTGCACCGCATGTTGCGCGCAGCAGAAGA GTATTCTATGAATGTGGGCTTTTTGGGCAAAGGCAATAGCTCTAGCAAAAAACAACTTGTAGAACAAGTAGAAGCGGGCG CGATTGGTTTTAAATTGCATGAAGACTGGGGCACAACACCAAGTGCGATCGATCACTGCTTGAGCGTGGCAGATGAATAC GATGTGCAAGTTTGTATCCACACCGATACAGTCAATGAGGCAGGTTATGTAGATGACACCCTAAATGCAATGAACGGGCG CGCCATCCATGCCTACCACATTGAGGGAGCGGGTGGAGGACACTCACCTGATGTTATCACCATGGCAGGCGAGCTCAATA TTCTACCCTCCTCCACCACCCCCACTATTCCCTATACCATTAATACGGTTGCAGAACACTTAGACATGCTCATGACATGC CACCACCTAGACAAACGCATCCGCGAGGATTTACAATTTTCTCAAAGCCGTATCCGCCCCGGCTCTATCGCGGCTGAAGA TGTGCTCCATGATATGGGTGTGATCGCGATGACAAGCTCGGATTCGCAAGCAATGGGGCGTGCAGGCGAAGTGATTCCTC GAACTTGGCAGACTGCGGATAAGAATAAAAAAGAATTTGGTAAGCTTCCTGAAGATGGCAAAGATAACGATAATTTCCGC ATTAAGCGCTACATCTCCAAATACACTATCAACCCCGCTTTGACCCACGGCGTGAGCGAGTATATCGGCTCTGTGGAAGA GGGCAAGATCGCCGACTTGGTGGTGTGGAATCCTGCCTTTTTTGGCGTAAAACCCAAAATCGTGATCAAAGGCGGTATGG TGGTCTTCTCTGAAATGGGCGATTCTAACGCGTCTGTGCCCACTCCCCAACCGGTTTATTACCGCGAAATGTTTGGGCAT CACGGCAAGGCGAAATTTGACACCAGCATCACTTTTGTTTCCAAAGTCGCCTATGAAAATGGCGTGAAAGAAAAGCTGGG CTTAGAGCGCCAAGTTCTACCGGTCAAAAACTGCCGTAACATCACCAAGAAAGACTTCAAGTTCAACGACAAAACGGCAA AAATCACCGTCGATCCGAAAACCTTCGAGGTCTTTGTAGATGGCAAACTCTGCACCTCTAAACCCACCTCGCAAGTGCCT CTAGCCCAGCGCTACACTTTCTTCTAG Protein sequence : MKMKKQEYVNTYGPTKGDKVRLGDTDLWAEVEHDYTTYGEELKFGAGKTIREGMGQSNSPDENTLDLVITNAMIIDYTGI YKADIGIKNGKIHGIGKAGNKDMQDGVSPHMVVGVGTEALAGEGMIITAGGIDSHTHFLSPQQFPTALANGVTTMFGGGT GPVDGTNATTITPGKWNLHRMLRAAEEYSMNVGFLGKGNSSSKKQLVEQVEAGAIGFKLHEDWGTTPSAIDHCLSVADEY DVQVCIHTDTVNEAGYVDDTLNAMNGRAIHAYHIEGAGGGHSPDVITMAGELNILPSSTTPTIPYTINTVAEHLDMLMTC HHLDKRIREDLQFSQSRIRPGSIAAEDVLHDMGVIAMTSSDSQAMGRAGEVIPRTWQTADKNKKEFGKLPEDGKDNDNFR IKRYISKYTINPALTHGVSEYIGSVEEGKIADLVVWNPAFFGVKPKIVIKGGMVVFSEMGDSNASVPTPQPVYYREMFGH HGKAKFDTSITFVSKVAYENGVKEKLGLERQVLPVKNCRNITKKDFKFNDKTAKITVDPKTFEVFVDGKLCTSKPTSQVP LAQRYTFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 9e-150 | 59 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 9e-150 | 59 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-142 | 58 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-142 | 58 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-142 | 58 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-142 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureB2 | YP_004074031.1 | urease subunit alpha | VFG0270 | Protein | 0.0 | 74 |
