|
Name : ureB (HFELIS_11980) Accession : YP_004073872.1 Strain : Helicobacter felis ATCC 49179 Genome accession: NC_014810 Putative virulence/resistance : Virulence Product : urease subunit B Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 1179013 - 1180722 bp Length : 1710 bp Strand : + Note : - DNA sequence : ATGAAAAAGATTTCACGAAAAGAATATGTTTCTATGTATGGTCCCACTACCGGGGATCGTGTTAGACTCGGCGACACTGA TTTGATCTTAGAAGTGGAGCATGATTGCACCACTTATGGTGAAGAGATCAAATTTGGGGGCGGTAAAACTATCCGTGATG GGATGAGTCAAACCAATAGCCCTAGCTCTTATGAATTAGATTTGGTGCTCACTAACGCCCTCATTGTGGACTATACGGGC ATTTACAAAGCCGACATTGGGATTAAAGACGGCAAGATTGCAGGCATTGGCAAGGCAGGCAATAAGGACATGCAAGATGG CGTAGATAATAATCTTTGCGTAGGTCCTGCTACAGAGGCTTTGGCAGCTGAGGGCTTGATTGTAACCGCTGGTGGCATCG ATACGCATATTCACTTTATCTCTCCCCAACAAATCCCTACTGCTTTTGCCAGCGGGGTTACAACCATGATTGGAGGAGGC ACAGGACCTGCGGATGGCACGAATGCGACCACCATCACTCCCGGACGCGCTAATCTAAAAAGTATGTTGCGTGCAGCCGA AGAATACGCCATGAATCTAGGCTTTTTGGCTAAGGGGAATGTGTCTTACGAACCCTCTTTACGCGATCAGATTGAAGCAG GGGCGATTGGTTTTAAAATCCACGAAGACTGGGGAAGCACACCTGCAGCTATTCACCACTGCCTCAATGTCGCCGATGAA TACGATGTGCAAGTGGCTATCCACACCGATACCCTTAACGAGGCGGGCTGTGTAGAAGACACCCTAGAGGCGATTGCCGG GCGCACCATCCATACCTTCCACACTGAAGGGGCTGGGGGTGGACACGCTCCAGATGTTATCAAAATGGCAGGGGAATTTA ACATTCTACCCGCCTCTACTAACCCGACCATTCCTTTCACCAAAAACACTGAAGCCGAGCACATGGACATGTTAATGGTG TGCCACCACTTGGATAAAAGTATCAAGGAAGATGTGCAGTTTGCCGATTCGAGGATTCGCCCCCAAACTATCGCGGCTGA AGACCAACTCCATGACATGGGGATCTTTTCTATCACCAGCTCCGACTCTCAGGCTATGGGACGCGTAGGCGAGGTGATCA CACGCACTTGGCAGACAGCAGACAAAAACAAAAAAGAGTTTGGGCGCTTGAAAGAGGAAAAAGGCGATAACGACAACTTC CGCATCAAACGCTACATCTCTAAATACACCATCAACCCCGCGATCGCGCATGGGATTTCTGACTATGTGGGCTCTGTGGA AGTGGGCAAATACGCCGACCTCGTGCTTTGGAGTCCGGCTTTCTTTGGCATTAAGCCCAATATGATTATTAAGGGCGGAT TTATTGCGCTCTCTCAAATGGGCGATGCCAATGCGTCTATTCCCACCCCTCAGCCCGTCTATTACCGTGAAATGTTTGGA CACCATGGGAAAAACAAATTCGACACCAATATCACTTTCGTGTCCCAAGCGGCTTACAAGGCAGGGATCAAAGAAGAACT AGGGCTAGATCGCGTGGTATTGCCAGTGAAAAACTGTCGCAATATCACTAAAAAGGACCTCAAATTCAACGATGTGACCG CACATATTGATGTCAACCCTGAAACCTATAAGGTGAAAGTGGATGGCAAAGAGGTAACCTCTAAAGCAGCAGATGAATTG AGCCTAGCGCAACTTTATAATTTGTTCTAG Protein sequence : MKKISRKEYVSMYGPTTGDRVRLGDTDLILEVEHDCTTYGEEIKFGGGKTIRDGMSQTNSPSSYELDLVLTNALIVDYTG IYKADIGIKDGKIAGIGKAGNKDMQDGVDNNLCVGPATEALAAEGLIVTAGGIDTHIHFISPQQIPTAFASGVTTMIGGG TGPADGTNATTITPGRANLKSMLRAAEEYAMNLGFLAKGNVSYEPSLRDQIEAGAIGFKIHEDWGSTPAAIHHCLNVADE YDVQVAIHTDTLNEAGCVEDTLEAIAGRTIHTFHTEGAGGGHAPDVIKMAGEFNILPASTNPTIPFTKNTEAEHMDMLMV CHHLDKSIKEDVQFADSRIRPQTIAAEDQLHDMGIFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNF RIKRYISKYTINPAIAHGISDYVGSVEVGKYADLVLWSPAFFGIKPNMIIKGGFIALSQMGDANASIPTPQPVYYREMFG HHGKNKFDTNITFVSQAAYKAGIKEELGLDRVVLPVKNCRNITKKDLKFNDVTAHIDVNPETYKVKVDGKEVTSKAADEL SLAQLYNLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 4e-156 | 63 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 4e-156 | 63 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 7e-147 | 61 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-146 | 61 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 1e-146 | 61 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-146 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureB | YP_004073872.1 | urease subunit B | VFG0270 | Protein | 0.0 | 89 |
