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Name : tkt (HFELIS_11290) Accession : YP_004073803.1 Strain : Helicobacter felis ATCC 49179 Genome accession: NC_014810 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1118707 - 1120650 bp Length : 1944 bp Strand : - Note : - DNA sequence : ATGGATAATCGGTTAAAAGAGCAGGATTTACCCCTCTTACAAGAATGCGCCCAAACTCTGCGTTTTTTGAGCGCGGACAT GGTGCAAAGGGCCAATAGCGGGCACCCCGGCGTGGCGATGGGCTTGGCAGAGGTGGGGGTGGTGTTGGGGCGGCATGTGC GCCTCAACCCGTCTAACCCGCATTGGCTCAATCGGGATCGTTTGGTCTTTAGTGGGGGGCATGCCAGTGCATTTGTATAT GCGCTCTTGCACCTATGGGGTTTTGATCTGAACTTAGAGGATCTAAAGGCTTTTAGACAGCTCGATTCTAAAACCCCCGG GCATTTAGAGTTTAAGCACACTCCGGGCGTGGAGATCACCACAGGGCCCCTAGGACAGGGTTTTGCCAACGCAGTGGGTT TTGCTTTGGGGGCTAAGATCGCCCAAAACTTGCTAGATAGCACAAGCATTAGCCATAAAGTTTATTGCCTCTGTGGAGAT GGGGATTTGCAAGAGGGGATCAGCTATGAGAGCGCGTCCTTAGCTGGACATTTGGGACTAGATAATTTGATTGTGATCTA TGATAGCAATGCGATCACCATTGAGGGGGACACCAACCTAGCCTTTAGTGAGAATGTGCGCGAACGCTTTAAGGCGCAAA ATTGGGAGGTGTTGGAGGGCGATGGGCATAATTTCTTAGAAATCGATCGCTTGTTAACGCGCGCCCAAGCCACCACAAAA CCTACTTTAATCATCGCTAAAACCACCATCGGCAAGGGGGCTTTAGGTTTGGAGGGAAGCGCAAAGGTGCATGGCGCGCC TTTGGGGGCAGAGGTTTTAGCGCGCTCTAAGGAGGCTTTGGGTTTGAGCGGGGATTTTGTGATCTCTGAGCGGGTAGCGC ACGCGCTCAACATGCAAGAAAAGGGACAACGCCTAGAGTTAGAGTGGCAAAGCTACCTAGAGAGTCAGCCCGATCTAAAG GCACGCATTGCCCACTTGCAGGCTAAAGACTTCTCTAAAGTCCAATACCCCACTTTTGAAGCGGGCAAAATGATCGCCAC ACGCGCGAGCAATGGGGCGATCTTAAACGCCTTGAGTGAGGCGTATTTAGGCTTTTTGGGGGGGAGTGCCGATCTTGCCC CCTCTAATAACACCCATTTAAAAGATCAAGCCGACTGCCTGCCCCCCCACTTTGGGCGCAATCTGCATTTTGGCATTCGT GAGCACGCTATGGGGGCTATGAGCAACGCCCTAGCTAATTATGGCTTGTTTGTGCCCTTTTGTGCGACCTTTTTTGTCTT TAGCGACTATGTGGCCCCTAGCTTGCGCTTGAGCGCGCTGATGGGCAATCAAATTTTCTACATTTTTACCCATGATAGTA TTGGGGTGGGCGAGGATGGTCCTACCCACCAGCCCATCGAACAATTAAGCCATTTAAGGGCGTTGCCAAATTTCTATGTC TTTAGACCCATGGACGCACATGAAAATGTGCGCTGTTGGCAGGTAGCACTCTCTTTAAATAAACCTTGCGCCTTTGTGCT CTCGCGCCAAAACTTGCCCGTGCACCCTAATATGCCCCTAGAGAGTGTGCAAAAAGGGGGGTATGTGGTGCATGCCCACC CTAACCCTCAAATCACTCTAGTGAGTAGTGGGAGCGAGGTTAGCCCCTGCTTAGAGGCGGTGCAAATTTTGCAAAATCAA GGTGTGGGGGTGCAGGTGGTCAGCGTGCCCTGCTTTGATCTGCTTTTAGAGCAGGATAAAACCTATTTAAAAAGCCTGTT TAAAGGTAAGGTGTTGGCAGTAGAGGCAGGACGGGGGCTGGAGTGGGGGCGTTTTGCCCACGATGTGCTAGGCATGGAGA GTTTTGGCAAGTCTGCCCCCGGGGGCGTGCTCTTCGATCATTTTGGCTTTAGCGCGCAAAATATCGCTAAGAGGGCGTGC ACGCTCGTAGAAGAGTCATGTTAG Protein sequence : MDNRLKEQDLPLLQECAQTLRFLSADMVQRANSGHPGVAMGLAEVGVVLGRHVRLNPSNPHWLNRDRLVFSGGHASAFVY ALLHLWGFDLNLEDLKAFRQLDSKTPGHLEFKHTPGVEITTGPLGQGFANAVGFALGAKIAQNLLDSTSISHKVYCLCGD GDLQEGISYESASLAGHLGLDNLIVIYDSNAITIEGDTNLAFSENVRERFKAQNWEVLEGDGHNFLEIDRLLTRAQATTK PTLIIAKTTIGKGALGLEGSAKVHGAPLGAEVLARSKEALGLSGDFVISERVAHALNMQEKGQRLELEWQSYLESQPDLK ARIAHLQAKDFSKVQYPTFEAGKMIATRASNGAILNALSEAYLGFLGGSADLAPSNNTHLKDQADCLPPHFGRNLHFGIR EHAMGAMSNALANYGLFVPFCATFFVFSDYVAPSLRLSALMGNQIFYIFTHDSIGVGEDGPTHQPIEQLSHLRALPNFYV FRPMDAHENVRCWQVALSLNKPCAFVLSRQNLPVHPNMPLESVQKGGYVVHAHPNPQITLVSSGSEVSPCLEAVQILQNQ GVGVQVVSVPCFDLLLEQDKTYLKSLFKGKVLAVEAGRGLEWGRFAHDVLGMESFGKSAPGGVLFDHFGFSAQNIAKRAC TLVEESC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 8e-93 | 41 |
