|
Name : TERMP_01115 (TERMP_01115) Accession : YP_004071314.1 Strain : Thermococcus barophilus MP Genome accession: NC_014804 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 973249 - 974616 bp Length : 1368 bp Strand : + Note : - DNA sequence : ATGCTCGACATAAAGCTCATTCGTGAAAACCCCGACATTGTTAAAGGTGACCTTATAAAGCGCGGTGAACTTGAAAAGCT CAAATGGATTGATGAAATTCTTGAGCTTGACAAGAAATGGAGAGAAAACCTCAGAAAGATTAACCAGCTGAGAAGAGAGA GGAACAGAATAGCTGTCGAGATAGGCAAAAGAAAGAAAGCGGGAGAAAGCGTGGATGACCTCCTTACAAAGAGCAAAGAG ATAGTCAAGCAGATTGAAATACTGGAGAAGGAAAACGAAGAAATAAGGAAGAAAATCGACTTCTACCTCTGGAGATTGCC AAACATAACCCATGAAAGTGTCCCAATTGGAAAGGACGATACCGAAAATGTTCCGATAAAATTCTGGGGCAAGGCAAGAG TCTGGAAAGGTCACCTTGAGAGCTTTCTTGAGCAGAGTCAAGGAAAGATGGAGTACGAGGTTTTAGAGTGGAAGCCAAAA CTTCATGTTGATTTGCTCGAGATTTTGAGAGGTGCAGATTTTGAAAGAGCTGCAAAGGTCAGCGGTTCAAGATTTTATTA CCTTCTCAATGAGATTGTTATCCTTGACTTAGCACTAATCCGCTTTGCTCTTGACAGGCTGATTGAGAAAGGATTCACAC CAGTTATTCCTCCCTATATGGTCAGGAGATACGTTGAAGAGGGTGTTACAACTTTTGACGACTTTGAAAACGTCATTTAC AAGGTTGAAGGCGAGGACTTGTATCTGATCCCGACAGCAGAGCACCCATTAGCTGGAATGCATGCCAACGAGATCATTGA TGGAAAAGATTTGCCACTCCTCTATGTTGGAGTCTCACCGTGCTTCCGTAAAGAAGCGGGAACTGCAGGAAAAGATACAA AGGGGATTTTCAGGGTCCACCAGTTCCACAAGGTTGAGCAGTTCGTCTATTCAAGACCAGAAGAGAGCTGGGAGTGGCAT GAAAAGCTCCTCCAGAACGCTGAAGAGCTGTTCCAAGAACTTGAGATTCCGTATAGAGTGGTCAATATCTGTACTGGAGA TTTGGGCTATGTTGCAGCTAAGAAATACGACATTGAAGCATGGATGCCGGGCCAAGGAAAGTTCAGAGAGGTTGTCAGCT GTTCAAACTGTACCGACTGGCAGGCAAGGAGGTTGAACATCAGATTCCGAGACAAGACTCATGAGAAGCCGAAGTTCGTA CACACCTTAAATTCAACAGCGATAGCAACCTCAAGAGCAATAGTTGCCATTTTGGAGAACTTCCAGGAAGAGGATGGAAC GGTTAGGATACCAAAGGCACTGTGGAAGTACACAGGATTCAAGGAAATTGTACCAGCAGATAAAAAAGAGAAGTGCTGTC AAAGTTAA Protein sequence : MLDIKLIRENPDIVKGDLIKRGELEKLKWIDEILELDKKWRENLRKINQLRRERNRIAVEIGKRKKAGESVDDLLTKSKE IVKQIEILEKENEEIRKKIDFYLWRLPNITHESVPIGKDDTENVPIKFWGKARVWKGHLESFLEQSQGKMEYEVLEWKPK LHVDLLEILRGADFERAAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRYVEEGVTTFDDFENVIY KVEGEDLYLIPTAEHPLAGMHANEIIDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWH EKLLQNAEELFQELEIPYRVVNICTGDLGYVAAKKYDIEAWMPGQGKFREVVSCSNCTDWQARRLNIRFRDKTHEKPKFV HTLNSTAIATSRAIVAILENFQEEDGTVRIPKALWKYTGFKEIVPADKKEKCCQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-78 | 42 |
