Gene Information

Name : exeE (PSM_A0728)
Accession : YP_004067827.1
Strain :
Genome accession: NC_014803
Putative virulence/resistance : Virulence
Product : general secretion pathway protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 785879 - 787444 bp
Length : 1566 bp
Strand : +
Note : -

DNA sequence :
ATGACTAATGCGATAGAAGATATTAATCAAGACGTTGTTCATCCAGCTGCACATAACAACAATGAAATGCTTGAACAAGA
GGATTTAATTGAGCTGCCTGCAAAGCGTTTGCCGTTTTCATATGCAAGGCGGGTGGGTGCGTTACTTAGTAAACATAAGG
ATAACCGAGTTGTTTACTACCGTGGCGAGTTGGATATTGATGTATTGCTAGAAGTGCGCCGCATTGCAGGACATGGCTTC
ACACTTGAGCAACTAGAAGATGATAAATTTGAGTTATTACTAGAAGCATCGTATCAACGTGACAGCTCAGAAACTCAGCA
AATGATGGAAGACATTGGTAACGAGGTTGATTTATTCTCGCTGGCTGATGAGCTTCCTCAAACTGAAGATTTACTTGCTG
GTGATGACGACGCGCCTATTATCAAACTCATTAATGCCATGTTGAGTGAGGCCATTAAGGAAGGCGCATCTGATATCCAC
ATTGAAACGTTTGAACAAGAACTGGTTATTCGTTTTCGAGTGGATGGCGTACTCAAAGAAGTTTTAAAACCTAATCGTAA
ATTAGCCTCTTTGCTGGTATCGCGTATTAAAGTAATGGCCAAACTCGATATTGCAGAAAAACGTATACCGCAAGATGGCC
GTATTAGTTTACGTATTGCAGGGCGTGCAGTAGATGTGCGTGTATCGACTATGCCATCGAGCTTTGGTGAGCGAGTCGTA
TTGCGTTTGCTTGATAAAAACAATGCGCGTTTAAACCTTGAAGATTTAGGCATGACCGCGAAAAACCGAGAGCTATTTGC
TGATTTAATTAGTAAGCCTCACGGTATAATCTTAGTTACAGGCCCTACAGGCTCTGGTAAAAGTACTACTTTATATGCCG
GTATGAGCCAAATTAACTCGCGGGATCGCAATATTTTAACGGTTGAAGATCCCATTGAGTATGAAATCCCAGGTATTGGC
CAAACACAGGTTAATACCAAGGTTGATATGACTTTTGCCCGTGGCCTACGCGCTATTTTACGTCAAGATCCTGATGTGGT
TATGGTTGGTGAAATACGTGACTTAGAAACCGCTCAAATTGGTGTACAAGCATCGCTGACTGGTCACTTAGTTATGTCTA
CATTGCATACCAATACCGCCTCAGGTGCAATTACCCGTATGGAAGATATGGGTGTTGAGCCATTCTTATTATCGTCATCA
TTACTCGGCGTATTGTCACAGCGCTTAGTACGTACCTTATGCAATAGCTGTAAAGAAGGGCATATTGCAGATGAGCGTGA
ATGTGAATTACTCGGCGTACCGTTTGATAATGCTCCGACGATTTACCGCGCGGTAGGGTGTGAAGAGTGTAACTTTAACG
GTTATCGTGGTCGTACAGGTATTCACGAATTATTAGTCGTTGATGAAACTATTCGTGAAATGATCCACAGCGGTAAAGGT
GAGCAAAGCGTAGAGAAATATATTCGTAAACGCAGCCCAAGTATTCGTCAAGATGGCTGCAGCCGCGTACTTGCGGGTAA
AACAACGCTTGAAGAAGTATTACGCGTAACCCGTGAGGAAGGCTAA

Protein sequence :
MTNAIEDINQDVVHPAAHNNNEMLEQEDLIELPAKRLPFSYARRVGALLSKHKDNRVVYYRGELDIDVLLEVRRIAGHGF
TLEQLEDDKFELLLEASYQRDSSETQQMMEDIGNEVDLFSLADELPQTEDLLAGDDDAPIIKLINAMLSEAIKEGASDIH
IETFEQELVIRFRVDGVLKEVLKPNRKLASLLVSRIKVMAKLDIAEKRIPQDGRISLRIAGRAVDVRVSTMPSSFGERVV
LRLLDKNNARLNLEDLGMTAKNRELFADLISKPHGIILVTGPTGSGKSTTLYAGMSQINSRDRNILTVEDPIEYEIPGIG
QTQVNTKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIGVQASLTGHLVMSTLHTNTASGAITRMEDMGVEPFLLSSS
LLGVLSQRLVRTLCNSCKEGHIADERECELLGVPFDNAPTIYRAVGCEECNFNGYRGRTGIHELLVVDETIREMIHSGKG
EQSVEKYIRKRSPSIRQDGCSRVLAGKTTLEEVLRVTREEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 6e-147 66
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-147 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
exeE YP_004067827.1 general secretion pathway protein E VFG2048 Protein 3e-146 65
exeE YP_004067827.1 general secretion pathway protein E VFG0182 Protein 1e-143 65
exeE YP_004067827.1 general secretion pathway protein E VFG1876 Protein 1e-125 57
exeE YP_004067827.1 general secretion pathway protein E VFG2426 Protein 6e-67 45
exeE YP_004067827.1 general secretion pathway protein E VFG0112 Protein 4e-81 43