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Name : exeD (PSM_A0727) Accession : YP_004067826.1 Strain : Genome accession: NC_014803 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 783820 - 785886 bp Length : 2067 bp Strand : + Note : - DNA sequence : ATGGTTCAGGTGCTACACCTCAAAAAAATTAAAAAAGGGTTAGCTAAGTATGCGGCACTTTTTTTAGCGGCAAGTCTTTC TATGTCGGTTGCTGCTGTTGAATATGCTGCTAACTTTAAGGGCACAGATATTAATGAGTTTATTAATATTGTGGGCAAAA ACCTTAATAAAACCATCATTATTGATCCTAACGTGCGTGGCAAAGTTAATGTGCGCAGTTATGAGTTAATGGATGAGGCA CTTTATTATCAATTCTTTTTAAATGTATTAGAAGTTTACGGCTATTCAGCTGTTGAAATGGATAACAACATTATAAAAAT AGAAAAAAGTTCAGATGCTAAAAAATCCAATGTACCGTTAATTACAACGGACAGCGATGCAGCTGGCGATATGATGATCA CTCGGGTTGTACGAGTTAAAAATGTCAGCGTACAAGAGTTAGGCCCTTTGGTTCGCCAGTTTAGTGACCAAAAAGATGGC GGTCATGTTGCTAACTTTAATGCCGCTAACGTGATGATGCTAACAGGACACGCAGCCTCTGTTAATCGTTTGGTAGAAAT TATTCGCTCTGTTGACCAAGCGGGTGATAAGCGCGTTGATATTGTAAAACTTAAATATGCAACAGCTGATGATGTGGTAT CGGTAGTTGATAATATTTATAAAGACAGTGGCAAGGGCAGCGTTCCTGAGTTTTTAATTCCTAAAGTTGTGGCTGATGGC CGAACTAATAGCGTGATTGTGAGTGGTGAAGGTCAAGCTCGTACCCGCGCCATTGATCTTATTAAACGTCTCGACGGCGA ACTTGAAAGCCAAGGTAATACCAAAGTATTTTACCTAAACTACGCAAAGGCAGAAGATTTAGTCAAAGTACTTCAAGGTG TGAGTAAATCGCTGGCAGAGGATTCAAAAGGCGGAGCAACCAACAATGCGCGTAGTAGTAATAGAAACGACACGAGTATT GAAGCACATCCTGATTCTAACTCACTCGTCATTACCGCTCAGCCAGATACGATGCGTTCACTTGAATCGGTTATTGAGCG TTTAGATATTCGCCGCGCACAAGTATTAGTAGAAGCCATTATTATTGAAGTCATGGAAGGTGATGGCGTTAACTTTGGCC TGCAATGGATTTCAGAGCAAGGTGGGATGCTACAATTTAATAATGGTACAACAGTACCTGTTGGTTCGTTAGCCGTAGCG GCAGAACAAGCCCGTGATAAAACGGTAACTAAAAATATCATTGGTACTGAATCAGGTACTGTCACCAAATATGATGAAAC AACTGAAGGTGACTACGGCCCACTAGCATCATTACTCGGTGGTATTAATGGCTTAGCCATGGGGGTAATTAAAAATGACT GGGGCGCAATTGTTCAAGCTGTTTCAACCGACACTAATTCGAATATTCTAGCGACTCCATCTATTACTACAATGGATAAC GAAGAAGCATCTATTTTAGTTGGTCAAGAAGTGCCAATCATTACTGGTTCGCAAACAGGTAGTAACAACGAAAATCCATT TCAAACGGTTGAGCGTCAAGAGGTGGGTATTAAACTTAAAGTAACCCCTCAAATTAATGATGGTTCAGCGGTGCAGTTGA CCATAGAGCAAGAAGTTTCAAGTGTTAGTGGCGCAACAGCAGTCGATATTTCGGTGAACAAGCGCGCAATTAAAACTACT GTAATGGCCGATGATGGCGGTATGGTGGTATTGGGTGGCTTGATTGATGAAGATGTACAAGAGAGCGTTTCAAAAGTGCC ACTATTAGGCGACATTCCTATTTTAGGCCACTTGTTTAAGTCAACTAATACAACAAAGCGAAAACGTAATCTAATCGTGT TTATTAGACCGACCATTATTCGCGATGGCATTAGTATGAATAAGCTCAGCTTTAGTAAATATAACTTTATTCGCGGTGAG CAATTTAAAAAGCGTGAAGATGGCATTAACTTAATGCCAATGTCTGATACGCCTATTTTACCTGAGTGGAATGACGAATT AGTGTTACCACCTACGTACGAAGAGCATTTACGCAAACAAAATGCACAAGAGCGTAACAATGACTAA Protein sequence : MVQVLHLKKIKKGLAKYAALFLAASLSMSVAAVEYAANFKGTDINEFINIVGKNLNKTIIIDPNVRGKVNVRSYELMDEA LYYQFFLNVLEVYGYSAVEMDNNIIKIEKSSDAKKSNVPLITTDSDAAGDMMITRVVRVKNVSVQELGPLVRQFSDQKDG GHVANFNAANVMMLTGHAASVNRLVEIIRSVDQAGDKRVDIVKLKYATADDVVSVVDNIYKDSGKGSVPEFLIPKVVADG RTNSVIVSGEGQARTRAIDLIKRLDGELESQGNTKVFYLNYAKAEDLVKVLQGVSKSLAEDSKGGATNNARSSNRNDTSI EAHPDSNSLVITAQPDTMRSLESVIERLDIRRAQVLVEAIIIEVMEGDGVNFGLQWISEQGGMLQFNNGTTVPVGSLAVA AEQARDKTVTKNIIGTESGTVTKYDETTEGDYGPLASLLGGINGLAMGVIKNDWGAIVQAVSTDTNSNILATPSITTMDN EEASILVGQEVPIITGSQTGSNNENPFQTVERQEVGIKLKVTPQINDGSAVQLTIEQEVSSVSGATAVDISVNKRAIKTT VMADDGGMVVLGGLIDEDVQESVSKVPLLGDIPILGHLFKSTNTTKRKRNLIVFIRPTIIRDGISMNKLSFSKYNFIRGE QFKKREDGINLMPMSDTPILPEWNDELVLPPTYEEHLRKQNAQERNND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 3e-161 | 52 |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-153 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| exeD | YP_004067826.1 | general secretion pathway protein D | VFG2047 | Protein | 1e-150 | 51 |
