Gene Information

Name : ksdD (PSM_A0405)
Accession : YP_004067511.1
Strain :
Genome accession: NC_014803
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 435014 - 435985 bp
Length : 972 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAACGCTAAACTTTATTCAACAAGGGTTACGTGTTCTAGAGATTGAACGCCAAGCACTCAGCGATATTACACAATA
CGTTAATGAAAGCTTTAACCAAGCCTGTCAATTAATGTTTGACTGCTCAGGTCGTATTATTGTTATTGGCATGGGTAAAT
CAGGCCATATTGGTAACAAAATAGCCGCCACTCTTGCCAGTACCGGCAGCCCCGCATTTTTTGTTCACCCGGGTGAAGCA
AGCCATGGTGATTTAGGAATGATCACAGCAAATGACGTGGTTATCCTCATTTCAAACTCTGGTGAAACCAGCGAAGTACT
TAATATTATTCCAGTATTAAAGCGCATTGGTGCCAAAATGATTGCCATGACAGGCAACCAAGGCTCAACCATGGCAACAT
TGGCAAATGTGCATGTGTGTATTAAAGTTGAACAAGAAGCCTGCTCATTGGGCTTAGCACCTACTGCAAGTACCACTGCC
ACACTCGCTATGGGTGATGCCATGGCGGTGGCATTATTAGAAGCACGCGGCTTTACTGCTGATGATTTTGCACTATCGCA
CCCTGGTGGTAGCTTAGGCAAGCGATTACTCTTAACTCTTAAAGATGTTATGCACAGTGGTGCTGATACACCTATCATTA
ACGAGACGCAAACGATTAAAGATGCCTTAATTGAAATGTCGGCCAAAGGACTCGGCATGACCGCTATTGTTGATAGTGAC
CAGCAATTATCAGGCCTGTTTACCGATGGCGATTTACGCCGTATTTTAGAGCAACGTATTGACATTCATAGCACTGAAAT
TAATGTTGTGATGACCAAGTCGTGTACTACAGCCACCCAAGAGATGCTCGCGGCTGAAGCGTTAAATATTATGGAACAAA
AACGTATTAATGGTTTAATTGTAATTAATGAGCATAATCAACCGATTGGCGCACTAAATATGCAAGACTTACTTAAAGCG
GGAGTGCTATAA

Protein sequence : 
MSTLNFIQQGLRVLEIERQALSDITQYVNESFNQACQLMFDCSGRIIVIGMGKSGHIGNKIAATLASTGSPAFFVHPGEA
SHGDLGMITANDVVILISNSGETSEVLNIIPVLKRIGAKMIAMTGNQGSTMATLANVHVCIKVEQEACSLGLAPTASTTA
TLAMGDAMAVALLEARGFTADDFALSHPGGSLGKRLLLTLKDVMHSGADTPIINETQTIKDALIEMSAKGLGMTAIVDSD
QQLSGLFTDGDLRRILEQRIDIHSTEINVVMTKSCTTATQEMLAAEALNIMEQKRINGLIVINEHNQPIGALNMQDLLKA
GVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-49 44
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-49 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 7e-49 44