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Name : PSM_A2849 (PSM_A2849) Accession : YP_004069913.1 Strain : Genome accession: NC_014803 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease, HsdR family Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 3041398 - 3044571 bp Length : 3174 bp Strand : - Note : - DNA sequence : ATGATCACGGAAGACCAACTAGAACAACTTTGTCTTAACTGGTTTCAAGGCATCGGCTATCAATATATTTGTGGTTATGA TATTGCCCCTAATGAACCTGCTGCTGAGCGCAGTGATTATCGCCAAGTGATATTGCATGGGCGTTTATTAGCACAGCTTA AAGTAATTAATCCGCATATTCCATTGGCGACCCTTGAAGAAGTCGCGTTGAACTTAGGGAAAGCCGAAACCCCGATACTG ATTAAAAATAATAAAGGCTTTCATCAAGCGCTATTGCAAGGTGTAAAAGTAGAATACAAAGTTAATGACGAAAGTAAAAC TGACAATACCAGAACAGGCTACGTTCAGCTGGTGGATTTTAACGATGTAAATAAAAACCAGTTTTTAGTGGTGAATCAGT TCACTTTAACGGGCACTAAAGGCAATCGCCGCCCAGATGTGATGGTGTTTATTAACGGCTTACCGTTGGCGCTATTGGAG CTGAAAAACCCCATTGATAATAACGCTGACATTTGGCAGGCGTTTCAACAAATTCAAACCTATAAAGATGAGCTACCTGA TTTATTTATTTTTAACGAGGCGCTTGTTGTTAGTGATGGCTTAACTGCAAGAGTGGGCTCGCTAACGGCTAATAAAGAGC GCTTTGTACCGTGGCGCACTGTAAATAGTGAAGATGACAAGCCGCTATTTGAATATCAGTTAGAAACCTTAGTAAAAGGT TTTTTTCAGCCTGCGCTGTTTTTAGATTATTTGCGCCACTTTATTCTGTTTGAAGAGGATGATGGTAAAACCATTAAAAA AATCGCGGGCTATCATCAATTTCACGCCGTGCGCGCTGCAGTAAAGGCAACATTAATTGCTGAAGCGAAGGCGCAGCTTG CAGAGCCTCGCGCTAATTATGTTGATAAAGTGCAGGCAGGCTCCGGCAAAGCAGGGGTTGTGTGGCACACCCAAGGTTCG GGTAAATCGATTTCGATGTTGTGCTATGCGGGTAAGCTGATGGCACAACCGCAAATGAATAACCCAACCATAGTGGTGGT AACGGATCGCAATGATTTAGACGGCCAGCTTTATAATACCTTTTGTATGGCAGCGGATACGTTAAAACAAACGCCAGTGC AAGCAGGGGATAGGGACGAGCTGCGTGATATTTTAACTGCTCGCCAAGCGGGTGGCATTATATTTACCACTATTCAAAAG TTTGCCCTGTTAGCTGATGAGAAAAGCCATCCTAAATTGAGTGAACGCCACAATATTGTGGTGATTTCAGATGAAGCTCA TCGCAGCCAATATGGCGATAAAGCCAAGTTAAACAGTAAAACAGGCGAATATACTTTTGGCTATTCTAAGCACTTACGCG ATGCGCTGCCACAAGCGACGTTTATTGGCTTTACTGGTACACCTATTGACGCTGCCGATAAAGATACACGCGCCGTATTT GGTGATTATGTGTCGGTTTATGATATTCAAGATGCGGTAGATGATGGTGCTACGGTGCCTATTTATTATGAATCACGCCT TGCCAAGCTGGATATCAACCAAGCAGATATAGAAAGCTTAAATGATGACGTAGATGAAGTGATTGAGGACGAAGAGGATA TTTCGAGCCGAGAAAACACTAAATCAAAATGGGCAGCGCTTGAAAAACTAGTAGGCAGTGAGCCCAGAGTTAATTTAGTT GCAAAAGATTTAGTGGCGCACTTTAGTGAGCGTACCAATACTATGCAGGGCAAAGGCATGATAGTGGCAATGAGCCGCGA AATTTGTGCTGATTTATACAATGCCATAATCGCTATTAAACCCGACTGGCACGATGATGACCCCGCCAAAGGCGCAATTA AAATTGTTATGACTGGCTCAGCGTCAGACAAAGCGAAGCTACAGCCACACATTTACAATAAAGAAACTAAAAAGCTGTTT GAAAAACGCTTTAAAGATGTAAATGACCCGCTGCAATTGGTAATAGTGCGCGATATGTGGTTAACGGGCTTTGATGCGCC AAATTGCCACACTATGTACATCGACAAACCCATGAAAGGCCATAATTTAATGCAGGCCATTGCCCGCGTTAATCGGGTAT TTAAAGACAAGCCCGGTGGTTTAGTGGTCGATTACATTGGAATTGCCAATGAATTAAAAGCTGCGCTGCACACTTACACT AATTCAAACGGTCGTGGCCAGCCCACTCATGATGCTCACGAAGCGTTTGCGGTATTACTTGAAAAAATGGATATTGTGCG TGGCATGCTACATGGCTGTGATTACAGTGACTATGAAACTCACGCACTGCAATTATTGCCTAAAGTGATGAATCATATTT TAAGCTTACCTAACTCGGGCGATGGTAAGCTTGACGGTAAAAAACGCTTTTTAGATGTGATGGCAGCGCTTAGTAAGGCG TACACTTTATGCGGCACGCTAGATGAAGTGGCTCCCCTTAAAACTGAAATTGCTTTTTTTGCCGCAGTAAAAAGCGCATT GGGCAAATTTACCACCGTAGATAAACGCCGCACCGATGAGGATAAAAACACCGCCCTTAAACACATCATCGACAATGCGC TTATTGCTGAAGGTGTTGACGATATTTTTAAGCTGGTGGGCTTAGATAAACCTAATATTGGTTTGTTATCGCCTGAGTTT ATGGAAGACGTGGCGAACATGAAAGAAAAAAACCTCGCCGTTGACTTACTCGAGAGACTATTACGTGACGAAATAAAAGC GCGAATGAAAACAGATGTAGTATCAGAGAAAAAATACTCTGACCGTATTCTAGAAACGCTGCGTAAATACCATAACCGCG CTATTGAAACAGCTCAGGTGATTGAAGAGTTAATCAAAATGGCCAAAGACATGGCCGCCGATGCTGAAATGGCTGAAAAT TCAGGATTAAATACCGATGAAATAGCTTTTTATCGTGCGCTGATTCAAAACGAATCCGCAGTACGCGAACTTGGTGATGA CTCGCTGCGCAGTTTAGCAAAAGAAGTGACCGAAAAGCTGCGTAAGTCGACCACGGTTGATTGGCAGGTACGCGATAGCG TGCGCGCAAAGCTGCGCAACTTAGTGCGCAGAGCATTACGTAAGTTTAAGTACCCGCCAGATAAGGCAGATGAGGCAATA GAGCTGTGTTTAAAGCAAGCTGAAGCGCTAAGTAATAGCTGGACACAAGACTAA Protein sequence : MITEDQLEQLCLNWFQGIGYQYICGYDIAPNEPAAERSDYRQVILHGRLLAQLKVINPHIPLATLEEVALNLGKAETPIL IKNNKGFHQALLQGVKVEYKVNDESKTDNTRTGYVQLVDFNDVNKNQFLVVNQFTLTGTKGNRRPDVMVFINGLPLALLE LKNPIDNNADIWQAFQQIQTYKDELPDLFIFNEALVVSDGLTARVGSLTANKERFVPWRTVNSEDDKPLFEYQLETLVKG FFQPALFLDYLRHFILFEEDDGKTIKKIAGYHQFHAVRAAVKATLIAEAKAQLAEPRANYVDKVQAGSGKAGVVWHTQGS GKSISMLCYAGKLMAQPQMNNPTIVVVTDRNDLDGQLYNTFCMAADTLKQTPVQAGDRDELRDILTARQAGGIIFTTIQK FALLADEKSHPKLSERHNIVVISDEAHRSQYGDKAKLNSKTGEYTFGYSKHLRDALPQATFIGFTGTPIDAADKDTRAVF GDYVSVYDIQDAVDDGATVPIYYESRLAKLDINQADIESLNDDVDEVIEDEEDISSRENTKSKWAALEKLVGSEPRVNLV AKDLVAHFSERTNTMQGKGMIVAMSREICADLYNAIIAIKPDWHDDDPAKGAIKIVMTGSASDKAKLQPHIYNKETKKLF EKRFKDVNDPLQLVIVRDMWLTGFDAPNCHTMYIDKPMKGHNLMQAIARVNRVFKDKPGGLVVDYIGIANELKAALHTYT NSNGRGQPTHDAHEAFAVLLEKMDIVRGMLHGCDYSDYETHALQLLPKVMNHILSLPNSGDGKLDGKKRFLDVMAALSKA YTLCGTLDEVAPLKTEIAFFAAVKSALGKFTTVDKRRTDEDKNTALKHIIDNALIAEGVDDIFKLVGLDKPNIGLLSPEF MEDVANMKEKNLAVDLLERLLRDEIKARMKTDVVSEKKYSDRILETLRKYHNRAIETAQVIEELIKMAKDMAADAEMAEN SGLNTDEIAFYRALIQNESAVRELGDDSLRSLAKEVTEKLRKSTTVDWQVRDSVRAKLRNLVRRALRKFKYPPDKADEAI ELCLKQAEALSNSWTQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 63 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 45 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 45 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 44 |
