Gene Information

Name : PSM_A2518 (PSM_A2518)
Accession : YP_004069583.1
Strain :
Genome accession: NC_014803
Putative virulence/resistance : Unknown
Product : transposase ORFB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2687222 - 2688010 bp
Length : 789 bp
Strand : -
Note : -

DNA sequence :
GTGGATTTTATTGATGCTTGCAGAGAGCATTACGGTGTCGAGTCAATTTGCAAGGAATTGCCGATTGCACCATCAACGTA
TTATTCTCATAAACAGATACAAAGAGAGCCTGAGCGACTGTCTAACCGCAAAAAGCGTGATGCTGAGCTGATAATACTCA
TTCGCGAAGTGTGGGAGGATAATATGTCAGTTTATGGTGCAAGAAAAATATGGAAGCAGCTACAGCTTGACGACCATCAA
GTCGCCCGCTGTACAGTCGAACGATTGATGCGAGTTATGGGAATTCAAGGTGTTCGTCGGGGTAAAGCACATAAGACAAC
GATACCTGACGAGCAACAAGATAAGCCACTTGATTTAGTTAATCGTCAATTTACTGCTGAGCAGCCAAATCAACTTTGGG
TAGCTGACATCACCTATGTTGCCACATGGAGTGGGTTTGTTTATGTCGCTTTCGTGATAGATGTTTTTTCACGATACATT
GTAGGTTGGCGTGTATCAACGACAATGCACACAGAGCTTATTCTTGATGCGTTAGAGCAAGCTATTTGGCATCGTGGCAA
CCCCGAAGGGTTAATTCACCACAGCGACAGAGGCAGCCAATATTTGTCTATACGATACACTGAGCGACTTGCTGAAGCTG
AAATTCAAGCGTCTGTAGGCAGTGTGGGTGACTCTTATGACAATGCATTGGCTGAAACAATAAATGGATTATTTAAAACA
GAGATTATTCGCAGAAATGTAAGCGCGCAATTAAACCCACATACCAATATTAATGCTACCTATGCATAA

Protein sequence :
MDFIDACREHYGVESICKELPIAPSTYYSHKQIQREPERLSNRKKRDAELIILIREVWEDNMSVYGARKIWKQLQLDDHQ
VARCTVERLMRVMGIQGVRRGKAHKTTIPDEQQDKPLDLVNRQFTAEQPNQLWVADITYVATWSGFVYVAFVIDVFSRYI
VGWRVSTTMHTELILDALEQAIWHRGNPEGLIHHSDRGSQYLSIRYTERLAEAEIQASVGSVGDSYDNALAETINGLFKT
EIIRRNVSAQLNPHTNINATYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 3e-54 63
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 9e-65 59
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 7e-65 59
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-64 59
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-64 59
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-55 58
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 4e-63 58
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-63 58
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-63 58
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-62 58
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-63 58
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-62 58
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-62 58
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-64 58
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-62 58
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-62 58
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-64 58
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 9e-65 58
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-62 57
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 6e-39 54
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 6e-48 51
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 3e-43 47
CDC7B_2035 YP_005163476.1 transposase-like protein Not tested Not named Protein 1e-35 46
CDCE8392_1985 YP_005134516.1 transposase-like protein Not tested Not named Protein 3e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSM_A2518 YP_004069583.1 transposase ORFB VFG1602 Protein 9e-63 57