Gene Information

Name : PSM_A2440 (PSM_A2440)
Accession : YP_004069505.1
Strain :
Genome accession: NC_014803
Putative virulence/resistance : Virulence
Product : response regulator in two-component regulatory system
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2600224 - 2601573 bp
Length : 1350 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAGTCACACTTCCATCAAGTGCTAAAGTTTTACTCGTTGATGATGATGCCAGCTTGCTGCAATTACTGGCGATTCG
AATTCAATCAAAGGGTTATGAAGTAACGACCTGTGATAGTGGTATGAACGCATTACAACTACTTAAAAACCAAGTGTTTG
ATGCGGTGATCACCGATTTAAGAATGGATGAAATGGATGGCATGGCGCTGCACCGACAATTGCAAAACCGCTACCCTGCG
TTGCCTGTTATTATGATGACGGCTCATGGATCTATCCCTGATGCGGTAGAGGCCACCAAGCAAGGTATTTTTGCCTTTAT
CACAAAACCCGTTGATAAAGATGAGCTGTTTGACAGCCTAGCCAAAGCCATTGAGATACATGGGGTTAATAATGATGAAG
TCGCCCCGCAAAGTAATATTGTCACCCGCAGTGGCGCTATGCTGCATTTGTTGGAGCAAGTGAAACTATTAGGGCCTACA
CAAGTTAACGTGCTTATTTCTGGTGCCAGCGGTACCGGTAAAGAGTTGCTTGCGCAGGCGATTCATCAGCATAGCCATGT
TAGTGACGGTCCATTTGTGGCAATAAACTGTGGGGCCGTGCCTGGTGAGCTATTAGAATCAGAGCTATTTGGTCACAAAA
AAGGGGCATTTACAGGAGCTGTAAAAGATCACCAAGGCCTATTTCAGCAAGCACAAGGCGGCACCTTATTTTTAGATGAG
ATTGGTGATATGCCGCTTAATTTACAAGTTAAGTTGTTACGTGTGCTGCAAGAAAAAACCATTCGCCCTGTGGGCTTTCA
AGAAGAAATTCCCATTAATGTACGAATTGTTTCTGCAACCCATAAAAACCTGCCTGAAGCGATTAGTAATCAACAGTTTA
GAGAAGATTTATACTACCGGTTAAACGTCGTAAACTTAAAGTTGCCCCCGCTGTGTGAACGCCGTGAAGATATTAGCTTA
TTAGCCAACTTTTTTAGTGCCAACATCGCAAAGCGTATGGAGCAAAAAGAAAAGCGCTTTGCAAACGATGCCATGCATGC
CCTAGTAAGGTATGATTGGCCAGGTAATATACGTCAATTACAAAATGTGGTGGAGCAGGTGGTTGCGTTGACTCCCAGTG
AGGTTATATCTGAACATTTAGTGCTTAGTGCGCTCAACAGTAATGAAAGCAACGTTGAGCCATTATCACTTAATGAAGCT
AAAAAAGAGTTTGAACGAGACTATGTAATTAATACCCTGAAAATGGCAGGGGGCAATGTGGCAGAAGGCGCTAAACTTGC
CAAGCGCAACCGTTCTGATTTTTATAAGTTGATTAAAAAGCATGAGATTGACGTAGATAGTTTAATTTAA

Protein sequence : 
MSVTLPSSAKVLLVDDDASLLQLLAIRIQSKGYEVTTCDSGMNALQLLKNQVFDAVITDLRMDEMDGMALHRQLQNRYPA
LPVIMMTAHGSIPDAVEATKQGIFAFITKPVDKDELFDSLAKAIEIHGVNNDEVAPQSNIVTRSGAMLHLLEQVKLLGPT
QVNVLISGASGTGKELLAQAIHQHSHVSDGPFVAINCGAVPGELLESELFGHKKGAFTGAVKDHQGLFQQAQGGTLFLDE
IGDMPLNLQVKLLRVLQEKTIRPVGFQEEIPINVRIVSATHKNLPEAISNQQFREDLYYRLNVVNLKLPPLCERREDISL
LANFFSANIAKRMEQKEKRFANDAMHALVRYDWPGNIRQLQNVVEQVVALTPSEVISEHLVLSALNSNESNVEPLSLNEA
KKEFERDYVINTLKMAGGNVAEGAKLAKRNRSDFYKLIKKHEIDVDSLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-68 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-68 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSM_A2440 YP_004069505.1 response regulator in two-component regulatory system BAC0467 Protein 1e-85 45
PSM_A2440 YP_004069505.1 response regulator in two-component regulatory system BAC0089 Protein 3e-82 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSM_A2440 YP_004069505.1 response regulator in two-component regulatory system VFG1249 Protein 3e-70 42
PSM_A2440 YP_004069505.1 response regulator in two-component regulatory system VFG1214 Protein 7e-80 41