Gene Information

Name : PSM_A2156 (PSM_A2156)
Accession : YP_004069224.1
Strain :
Genome accession: NC_014803
Putative virulence/resistance : Unknown
Product : integrase, phage family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2312535 - 2313770 bp
Length : 1236 bp
Strand : -
Note : -

DNA sequence : 
ATGGCTATTCACAACCTCAAAGCAAAGCAAGTCGACTCGGCTAAACCAAAAGCTAAGGAATATAACCTTACTGACGGTGG
CGGCTTAACATTACGAATAAAGCCCAGTGGTGGTAAATTTTGGCTTTATAACTACACAGCGCCAATTACTAAAAAACGTA
AAAATATGGGGCTTGGCTCTTACCCTGATATAAGTCTTAAAACTGCTAGAGAACGCCATAAAAAATATAAAGCCCTAGTG
CTTGAAAATATAGACCCTATCCACCAGCGCCAGCTAGATGAAAAGCAAGCACAAGAAACACACCTACAAACATTTAAAGC
AGTTTCTTTAATGTGGTTTGAGAAAAAGAAAACAGAAATAAAACCACAAACAGCACAAGCCGCTTTAAATCTGTTAACTA
ATCATGCCTTTCCTGCGTTTGGTGATGAACCAATAAGTAAATTAAAAGCCTTTCAAGTAATAGAGCTAGTGCGACCCATA
GAGGCAAAGGGCAGCTTAGAGACTGTAAAAAGACTATGCCAGCGTATTAACGAAGTAATGGTGCATGCGGTTAACTGTGG
GCTTATAGAAGCCAATCCACTAGCGAATATAAGGCAAGCATTCCAAGCGCCTAAAAAAAGCGCTATGCCGTCTATTGAAG
TGGATAGGCTACCTGAGCTAATGAGTGCCTTAAATCGTGCCAGTATTAAGCTTACAACGCGTTGTTTAATCGAATGGCAG
TTACACACCATGACACGCCCTAATGAGGCTGCAACAGCTAAATGGCAAGATATAGACTTAAATACTGGCGTGTGGGTTAT
ACCAGCCGAGCAAATGAAAAAGGGCAAAGAGCAACGCATACCCCTTACACCGCAAGCACTCGCTTTACTTGAATTAATGA
AACCAATAAGTGCGCACCGTGAATATGTATTTCCCGCTGATAGAGACCCACGCAGCCACGCGAACGTGCAAACAGCCAAT
GCAGCAATAAAGCGTATGGGGTTTAAAGGCGAGCTGGTGGCACATGGCTTGCGCTCGCTTGCCAGTACAACGCTTAATGC
ACAAGGATTTGACCCTGACGTAATAGAGGCAGCTTTAGCGCATGTTGATACAAACGAAGTAAGGCGAGCATATAACCGCA
CTGACTACTTTGAACGAAGAAAAACCATGATGTGCTGGTGGTCTGAGTATATAGAAAATGCGGCTAGTGGAAGTAGTTCG
TTAGCTGGGCTTAGCTATCTAAAGGTATTGAAATGA

Protein sequence : 
MAIHNLKAKQVDSAKPKAKEYNLTDGGGLTLRIKPSGGKFWLYNYTAPITKKRKNMGLGSYPDISLKTARERHKKYKALV
LENIDPIHQRQLDEKQAQETHLQTFKAVSLMWFEKKKTEIKPQTAQAALNLLTNHAFPAFGDEPISKLKAFQVIELVRPI
EAKGSLETVKRLCQRINEVMVHAVNCGLIEANPLANIRQAFQAPKKSAMPSIEVDRLPELMSALNRASIKLTTRCLIEWQ
LHTMTRPNEAATAKWQDIDLNTGVWVIPAEQMKKGKEQRIPLTPQALALLELMKPISAHREYVFPADRDPRSHANVQTAN
AAIKRMGFKGELVAHGLRSLASTTLNAQGFDPDVIEAALAHVDTNEVRRAYNRTDYFERRKTMMCWWSEYIENAASGSSS
LAGLSYLKVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-112 58
int AAK20773.1 integrase Not tested VPI Protein 1e-112 58
int AAK20803.1 integrase Not tested VPI Protein 1e-112 58
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-112 58
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-112 58
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 9e-107 55
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-90 48
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-90 48
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-90 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSM_A2156 YP_004069224.1 integrase, phage family VFG1092 Protein 6e-91 48