Gene Information

Name : mdeA (PSM_A2108)
Accession : YP_004069176.1
Strain :
Genome accession: NC_014803
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.11
Position : 2257362 - 2258543 bp
Length : 1182 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCAAGCATCATCCACACACCCAATGTATTCATGGCCCACAAAAAGCCAATGATCCCCATGGCGCATTAACCTCGCC
ATTATACCAAACATCGACATTTCATTTTGAAAATGCTGCGCAGGGTGCTGCACGGTTTGCTGGCGATGAGCCAGGTTATA
TTTATACGCGTTTGGGTAACCCTACCACCACTGAACTTGAACAAAAAGTGGCGCAATTAGAGGGCTGTGAGGCTGCAGCG
GCAACGGCTACAGGTATGGGAGCGGTATCGGCTTCGGTACTGAGCTTTTTATCACAAGGCGATCACTTAGTTGCATCGAG
TGCGCTTTATGGTTGCACCTTTGCTTTTTTTGCGCATATGTTGCTGCGTTGGGGCATTGAAGTCACCTTTGTGGATATGA
CCAATGAAGATGAGTTACGTGCTGCAATAAAGCCAAACTCAAAAATGATATTTGCAGAAACCCCGATAAACCCAACGATG
GCTGTTATTGATTTAGCACTTATTGGTAATGTAGCAAAACAGCATAATTTAATAAGTGTGGTCGACAATACCTTTTTAAC
GCCGCTGCTACAGTCACCTAAACAATACGGCATCGATATTATTATGCACAGTGCTACCAAGTATTTAAATGGTCACGGCG
ATGTAGTCGCAGGTATTGTGTGTGGATCCCTTGAGCACATTACACATATTAAAATGACGGTGTTAAAAGATATAGGCGCG
ACGATTAGCCCACACGATGCATGGTTAATTAATCGAGGTTTAAAAACATTAGCTATACGGGTAGAGCGTCATTGTCAGAG
TGCGCAAACAATTGCTGAATATTTAGAGGCTCACCCTCAAGTGAGTAAAGTGTACTATCCGGGACTGAAGTCGCACCCAG
GTTATCGGTTTATTGGTAAGCAAATGAAAGCTGCTGGCGGTGTTATTGCTTTTGAAATTAAAGGGAGTTTAACCGACGGT
GAGCAGTTTATTGATAGCATGAAGCTATGTACTTTAGCGGTTAGCTTAGGCGATGCCGAAACACTTATTCAACACCCTGC
ATCGATGACCCATTCGCCTTACACACCGGAAGAAAGATTAGCAGCCGGAATTAGTGATGGTTTAATTCGCTTATCTGTTG
GGCTTGAAGATGTTAATGATATTATTAACGATCTCAACCAAGCATTTACTAAAATATCGTAA

Protein sequence : 
MSKHHPHTQCIHGPQKANDPHGALTSPLYQTSTFHFENAAQGAARFAGDEPGYIYTRLGNPTTTELEQKVAQLEGCEAAA
ATATGMGAVSASVLSFLSQGDHLVASSALYGCTFAFFAHMLLRWGIEVTFVDMTNEDELRAAIKPNSKMIFAETPINPTM
AVIDLALIGNVAKQHNLISVVDNTFLTPLLQSPKQYGIDIIMHSATKYLNGHGDVVAGIVCGSLEHITHIKMTVLKDIGA
TISPHDAWLINRGLKTLAIRVERHCQSAQTIAEYLEAHPQVSKVYYPGLKSHPGYRFIGKQMKAAGGVIAFEIKGSLTDG
EQFIDSMKLCTLAVSLGDAETLIQHPASMTHSPYTPEERLAAGISDGLIRLSVGLEDVNDIINDLNQAFTKIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-63 43
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-62 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mdeA YP_004069176.1 methionine gamma-lyase BAC0207 Protein 3e-83 50