|
Name : kdsB (PSM_A1630) Accession : YP_004068708.1 Strain : Genome accession: NC_014803 Putative virulence/resistance : Virulence Product : CTP:CMP-3-deoxy-D-manno-octulosonate transferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1746841 - 1747605 bp Length : 765 bp Strand : - Note : - DNA sequence : GTGGAATTCGTAGTAGTTATTCCTGCGCGTTACGCTTCTACTCGTTTGCCAGGTAAGCCACTTGCTGATATTTGTGGCAA GCCAATGATCCAACATGTCTATGAAAAAGCGTGTTTGTCGGGAGCGAGTAAAGTGGTTATTGCCACCGATCATCAAAAAG TATTTGATGCGGCTAAACACTTTACCAATGATGTATTGATGACTCGAGAGGATCATCAATCAGGGACTGAACGGTTAGCA GAAGTCGTTGATTTACTAAATTTATCAGAAGATACTATCGTAGTTAATGTGCAGGGCGATGAACCATTATTATCCCCTGA TAACGTGTCACAAGTGGCTACATTATTAGCGCAATCAACCGCGCCTATGGCAACCCTAAGTGTTGCCATTGAAGAGCGTG ATGAGGTGTTTAACCCTAACGCGGTTAAAGTGGTCAGCGATATTAATAAAAATGCTTTGTACTTTTCAAGAGCCAGCATT CCATTTGATAGAAGTGCTATGATGGCAGAGCAGCAACCACTTAATTTAGCGCCTTTTCAACGCCATGTGGGTATTTACGC GTATCGCGCAGGGTTTATAAAGCAATATATTCAATTATCGGTATCACCATTAGAAGTTTTAGAATCACTAGAGCAGCTAA GGGTGCTTTACCATGGCTATGCGATTAAAATAGAGCAAACGCTGGTGACCCCTCATGCTGGGGTTGATACACCAGAGGAT TTAGCTAAAGTCGTTGCGCATATTCAAAGTAAAGCGCGTGAATAA Protein sequence : MEFVVVIPARYASTRLPGKPLADICGKPMIQHVYEKACLSGASKVVIATDHQKVFDAAKHFTNDVLMTREDHQSGTERLA EVVDLLNLSEDTIVVNVQGDEPLLSPDNVSQVATLLAQSTAPMATLSVAIEERDEVFNPNAVKVVSDINKNALYFSRASI PFDRSAMMAEQQPLNLAPFQRHVGIYAYRAGFIKQYIQLSVSPLEVLESLEQLRVLYHGYAIKIEQTLVTPHAGVDTPED LAKVVAHIQSKARE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 5e-37 | 46 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-36 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 4e-37 | 46 |
