Gene Information

Name : ICDCCJ07001_731 (ICDCCJ07001_731)
Accession : YP_004066287.1
Strain : Campylobacter jejuni ICDCCJ07001
Genome accession: NC_014802
Putative virulence/resistance : Virulence
Product : Type I restriction enzyme R protein N terminal protein (HSDR_N)
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0610
EC number : -
Position : 744474 - 747134 bp
Length : 2661 bp
Strand : +
Note : -

DNA sequence :
TTGCAAGGCTATGTAGAGATCAAAGGCATCAAAATTTACCTAGCCTTTGCCAAGCCAAATACCAATGCAAACGAAGAAAG
CGTGAAAAAATACGAGCAAAATAGCCTTTCTATCATACGCCAGCTTCACTATAGCACGCAAAATAAAAACTCCCTTGATA
TAGTGATCTTTTTAAATGGCTTGCCTCTTATCACCATAGAGCTTAAAAACCATTTCACAGGACAAAATGTCTTTCACGCT
ATAAAGCAATACAAAAAAGACAGAAACCCAAAAGAAGCTATATTTAACTATACGATAGTGCATTTTGCACTAGATAATGA
TCTTTGTTACATGAGTGCGAAATTAGATCAAGATGCGACTACATTTTTACCTTTTAACCTTGGTTTAAATAATGGTAGTG
GCAAAATAGGCTTAGCAAATGGAGCAGGTAATCCGCCAAGTGATGGTATAAAAACAGCTTATTTGTGGAAGAAAATCTTT
AAAAAAGATACTTTGCTAAATTTATTTTTTAATTTTGTGCAAGTTGTAAAAAAGAAAAATGAAGAAATCATCATATTTCC
TAGATACCATCAATTCGATGTAGTAGAAAAGCTACTCGCCCATGCAAAAGAAAACGGCACGGGGCAACGCTACTTGATCC
AGCATAGTGCAGGAAGTGGCAAGAGTAATTCTATATCTTGGCTTGCGCATAATCTCGTAAGCTTGCATAGACTTGAAAAA
AATATCTTTGATTCTATCATCGTAGTAACCGATAGAAAAGTGCTTGATAGCCAAATAAGAGAAAATGTAAAATCCTTTTC
ACAGACAAAAAATTTAGTAGAAGCCATCACTCATGGAAGCAAACAGCTTAAAAACGCTTTAGAAGAAGGTAAGAAAATCA
TCATCACAACCATACAAAAATTTCCTTTCATTTTAGATGAGATCAAAACTTTAAAAAGCAAAACTTTTGCTATCATCATC
GATGAAGCACACTCTAGCCAAAACGGAAGCAATGCTCAAAAAATGGCAGAAGCCATAAGGGATAAAAGTGGCGATGAAAG
TCAAAATTTAGATGATGAAATTTTAGAAATCATAAAAAATAAAAAACTCCAAAGCAATGCTTCTTATTTTGCATTTACCG
CTACGCCTAAGCCAAAAACCTTAGAAATGTTTGGTATGCCTTGTGATGTTAATGGAGAACAAATGTTTATCCCTTTTCAT
CTTTACTCGATGAAACAAGCCATAGAAGAAGGATTTATACTTGATGTATTAAAAGGCTATACAACCTATAAAAGTTACTA
TAAAATCATATCTTGTACAAATGATAATCCAAAACACGATAAAAAAAGAGCAAGTGTAAAACTAAAAGCCTATGTCCAAA
ACAATATCAAAACAATCGAACAAAAATCACAAATCATGTGTGAGCATTTTTTCCAAAATAGCTTTAAAAAGATAAATGGT
AAAGCAAAAGCTATGATTGTAACAAGCTCAAGAGAAAATGCTGTAAAGTATTATCTTGTTTTTAGGGAATATTTAAGAAA
AAATTATCCACATTTTAAAGCCATTGTAGCTTTTTCAGGTGAAGTAAATTTAGAAGGTGAAATTTATAGCGAAAGTGGTT
TAAATGGTTTTGCGGAAAATGTTTTAAAAGATGAGTTTAAAAAAGATGAGTATCGTTTTTTAATCGTTGCGGAAAAATAC
CAAACCGGATTTGATGAGCCATTATTACATACTATGTATGTGGATAAAGCATTAAGTGGGGTAAGTGCAGTACAAACTCT
ATCAAGACTAAACCGAACTTGCAAAAACAAAGAAAACACTTTTGTGCTAGATTTTGTAAATACTCATGAAGATATAGCAA
AATCTTTTAGTGTGTTTTATGAGCAAACTTATTTAAGTGAAGCCACAGATGATAATAGAATTTTTGATTTAAAGGCAAAT
CTAAATGAGTATGAAATTTATACCCAAGAAGAAATAGATGATTTTGCAAATGCTATTTTAAGAAAAGAAAAAGAAAATAT
CATTCATGCAAAATTGGACATAATGCTAGATAGATTTAATCAAAAAAGTGATGATGAAAAATTAGATTTTTATAATAAAG
CAAAAACTTATCTTAAAGAGTATTCTTTTCTTGCACAAATATTGCCTTATGAAGACATAGAGCTTGAAAAACTCTATATA
TTGCTTAAAAAACTTGCTAGTAAGATCATCTTGCCTAAATCAGAGGATTTAGCTAAAGGAATTTTAGATAATGTGGATTT
TGATAGTTATCGCTTACAACTTGATAAAACACAAGACATCGTTTTACAAGGAAATGGAGAGCTAAAGCCTTCGTTCGCAG
ATGGTTCGAGCAAAAGTGTTGAAGCTGAATTAGAAGAACTTTCAAACATCATCAAAGATTTTAATAACAAATACGCAAAT
ATAGACTTTAATGAAAGCGATAAAATCGCTAAAATCTTATACGATATAAAAGATGATATAGCAAAAAATGAAAGAATACG
TGAAACTTTTAGCAAATCCGATATACAAAATTCTCGTATCGAGTTTGATGCGCTTTTAAAAGATAAAATTCAAGATATCT
TGGAGTTAAATTTAGAACTTTTTAAACAATTTAATCAAAATATAGAATTTAAAGACAAGATAGCAAATACCATGTTTAAT
ATGGTTTGTAATGATTTTTAA

Protein sequence :
MQGYVEIKGIKIYLAFAKPNTNANEESVKKYEQNSLSIIRQLHYSTQNKNSLDIVIFLNGLPLITIELKNHFTGQNVFHA
IKQYKKDRNPKEAIFNYTIVHFALDNDLCYMSAKLDQDATTFLPFNLGLNNGSGKIGLANGAGNPPSDGIKTAYLWKKIF
KKDTLLNLFFNFVQVVKKKNEEIIIFPRYHQFDVVEKLLAHAKENGTGQRYLIQHSAGSGKSNSISWLAHNLVSLHRLEK
NIFDSIIVVTDRKVLDSQIRENVKSFSQTKNLVEAITHGSKQLKNALEEGKKIIITTIQKFPFILDEIKTLKSKTFAIII
DEAHSSQNGSNAQKMAEAIRDKSGDESQNLDDEILEIIKNKKLQSNASYFAFTATPKPKTLEMFGMPCDVNGEQMFIPFH
LYSMKQAIEEGFILDVLKGYTTYKSYYKIISCTNDNPKHDKKRASVKLKAYVQNNIKTIEQKSQIMCEHFFQNSFKKING
KAKAMIVTSSRENAVKYYLVFREYLRKNYPHFKAIVAFSGEVNLEGEIYSESGLNGFAENVLKDEFKKDEYRFLIVAEKY
QTGFDEPLLHTMYVDKALSGVSAVQTLSRLNRTCKNKENTFVLDFVNTHEDIAKSFSVFYEQTYLSEATDDNRIFDLKAN
LNEYEIYTQEEIDDFANAILRKEKENIIHAKLDIMLDRFNQKSDDEKLDFYNKAKTYLKEYSFLAQILPYEDIELEKLYI
LLKKLASKIILPKSEDLAKGILDNVDFDSYRLQLDKTQDIVLQGNGELKPSFADGSSKSVEAELEELSNIIKDFNNKYAN
IDFNESDKIAKILYDIKDDIAKNERIRETFSKSDIQNSRIEFDALLKDKIQDILELNLELFKQFNQNIEFKDKIANTMFN
MVCNDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 3e-142 42
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 3e-142 42
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 1e-141 42
SAS0025 YP_042158.1 type I restriction enzyme protein Not tested SCC476 Protein 1e-140 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ICDCCJ07001_731 YP_004066287.1 Type I restriction enzyme R protein N terminal protein (HSDR_N) VFG1098 Protein 1e-142 42