|
Name : ICDCCJ07001_365 (ICDCCJ07001_365) Accession : YP_004065962.1 Strain : Campylobacter jejuni ICDCCJ07001 Genome accession: NC_014802 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 369529 - 371034 bp Length : 1506 bp Strand : + Note : - DNA sequence : ATGTTTGATAATATTTTAGAGCAGCAAAGAATAGAAAAAGCCAAGGAATTAAAAAATTTAGGGATCAATCCTTATCCTCA TTTTTTAGAAAAAGAAATGTCTTTAAAGACTTTTAAGGATAAATTTTCTTATATTTTAGAGCAAGTTGAAAAAAGAGATG AAAGTGTCAATGCTGTTGTTGCAGGACGTTTGAAACTTTTGCGTATAGCTGGGAAATCGATTTTTGCAAACATTGAAGAT GAAGATACAAATTTGCAAATTTATTTTAATAAAGATAGTGTAGGTGAAGAACTTTATGCGATTTTGAAAAAGAATTTAGA AGTAGGTGATATTGTTTTGGTTAAAGGTTTTCCTTTTGTAACTAAAACAGGTGAGTTTAGTTTGCATGCAAGTGAAGTAA AACTCGCTACAAAAGCTATTGTTCCTTTACCTGAAAAATATCATGGATTAACAGATATTGAGCAAAGATATCGTAAACGT TATGTTGATATGATAATGAATGCAGAAGTTAGAAAAGATTTTTTAGTGCGTTCTAAAGTGGTGAGTTTGATTCGTCATTT TTTTGAAAATAAAGGCTTTTTAGAAGTAGAAACTCCTATGATGCATCCGATTGCAGGTGGAGCAAACGCTAAGCCTTTTG TAACTTTTCACAATTCTTTAGGCGTAGAAAGATTTTTAAGAATTGCTCCAGAACTTTATCTTAAAAGACTTGTAGTGGGT GGTTTTGAGGCAGTTTTTGAAATCAATCGTTGTTTTAGAAACGAAGGTATGGATTTAACCCATAATCCTGAATTTACAAC TATAGAATTTTATTGGGCTTATCATAATTATAAAGATTTAATGGATTTAACTGAAGAACTTTTTGCTTTACTTTTAGATA AACTTAATTTGGGAAAAACAATAGAATTTGATGGAAAAATGATAGATTTTTCTAAACCTTTTGAAAGAATTACTTACAAA GATGCACTTTGTAAATATGGTGGTTTGGATAGGGATTTAATTGAAGATAAGGAAAAAATTCTTACTAAATTAAAAGTAGA TGGTTTTGAAGCGAATGAAAAGCTTGAACTTGGACATTTACAAGCTGAACTTTTTGATAATTATGTGGAAGAAAAATTGA TCAATCCTACTTTTGTGATTGATTTTCCTATTTCCATAAGTCCTTTATCAAGACGTAGCGATGAGGATTCTCAGATTGCT GAGAGATTTGAGTTGTTTATTTGTGGAAGAGAATTGGCAAATGGTTTTAATGAGCTTAATGATCCTCTTGATCAATATGA GAGATTTTTAAAACAAATTGAAGCTAAAAATGCAGGCGATGAAGAGGCTTGCGAAATGGATGAAGATTTTGTAAATGCTT TGGGTTATGGAATGCCTCCAACGGCAGGGCAGGGTATAGGTATAGATAGACTTGTTATGCTTTTGACAAATAAAAAATCT ATTCGAGATGTGATATTGTTTCCTGCAATGCGTCCATTAAAATCAGAACTAAAGGAGAAAGAATGA Protein sequence : MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSYILEQVEKRDESVNAVVAGRLKLLRIAGKSIFANIED EDTNLQIYFNKDSVGEELYAILKKNLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKR YVDMIMNAEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELYLKRLVVG GFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMIDFSKPFERITYK DALCKYGGLDRDLIEDKEKILTKLKVDGFEANEKLELGHLQAELFDNYVEEKLINPTFVIDFPISISPLSRRSDEDSQIA ERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKS IRDVILFPAMRPLKSELKEKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-105 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ICDCCJ07001_365 | YP_004065962.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-105 | 47 |
