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Name : ICDCCJ07001_356 (ICDCCJ07001_356) Accession : YP_004065953.1 Strain : Campylobacter jejuni ICDCCJ07001 Genome accession: NC_014802 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 358088 - 359323 bp Length : 1236 bp Strand : + Note : - DNA sequence : ATGTTAGATTTAAAAAATTTGCAAAATAATTTTGATGAAGTGGCTAAAAAGTTAAAAAATAAAAAAGTTGATGAAAATAT CTTAAAAAAACTTGCTGAACTTTTTGCAAGTTTAAAAAAAGAAAAAACAGCTTTAGAAGAATTTCAAGCTTTTCAAAATA AATTCAGTAAAGAGCTTGCTACAGCCGAAGATAAAGAAAGTTTAAAAGCAAAATTAAGCGAAAATAAAAGTAAAATTAAT GAGCAAAGCGCTAAAGTAAATGCTTTAGAAAATGAGCTTGAAGAAATCGCTCATGCCATCCCAAATATCCCTGATGAGTG TGTGCCTGTGGGTGAAGACGAAGATGAAAATGTGGAGCTTAAAAAAGTTTTAAATCCACCTAGCTTTGATTTTACTCCAA AAGAACATTTTGAATTAGGTGAGAGTTTAAATTGGCTTGATTTTGTGCGTGGGGTAAAAATTTCACAAAGTCGTTTTTGT GTGCTTAAAAACGAAGGAGCTTTATTAAGCCGCGCTTTGGTAAATTATATGATAGATTTTAATAGAAGTCGTGGATTTGA ATTTGTTAATGTGCCTTTTTTGGTAAATGGTGCTACTATGTTTGGGACAGGTCAGTTGCCAAAATTTAAAGAAGATATGT ATAAGGTAGATGATGAGGATTTGTATTTGATCTCAACTTCTGAAATTCCAGTAACCAATCTTTATAGTGGAGAAATTTTA GCGAGTGAAACTTTACCGATAAAAATGACTTGTTATAGCGCTTGTTTTAGAAAAGAAGCAGGCAGTGCAGGGCGTGATAC AAGAGGTATTATAAGACAACACCAGTTTGAAAAAGTAGAGCTTGTAAGTATTACTAAACCTGAGCAAAGTGATAGCGTGT TTAATGAAATGCTTGAGTGTGCAAGTGATTTACTCAGTTCTTTAGGTTTAGCGCATAGACATTTGATGCTTTGCACCGGA GATTTGGGTTTTAGTGCAGCAAAAACTGTGGATCTTGAAGTGTGGCTTCCAGGACAAAATAAATATCGTGAGATCAGTTC TGTTTCAAATTGTCGTGATTTTCAAGCAAGACGTGCTAAAATTCGCTATAAAAATGAACAAGGAAAAAATGAGCTCGTTC ACACTCTTAATGGCTCATCTTTGGCAGTAGGAAGAACTTTGGTGGCGATTATGGAAAATTATCAAGATAAAGAAGGAAAA ATTCATATTCCTGATGTTTTGAAAAAATATTTTTAA Protein sequence : MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELATAEDKESLKAKLSENKSKIN EQSAKVNALENELEEIAHAIPNIPDECVPVGEDEDENVELKKVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFC VLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTNLYSGEIL ASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTG DLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQDKEGK IHIPDVLKKYF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-86 | 49 |
