Gene Information

Name : ICDCCJ07001_1572 (ICDCCJ07001_1572)
Accession : YP_004067063.1
Strain : Campylobacter jejuni ICDCCJ07001
Genome accession: NC_014802
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1613304 - 1613954 bp
Length : 651 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAGAACTTATTAAAATAAACAACTTAAATAAAGAATTTGGCAAAGTTAAAGCCTTAAACAATATCAACTTAAG
CGTCTATGAAGGAGAATGGCTTGCCATCATGGGTCCATCAGGAAGTGGAAAATCAACGCTTTTAAACATACTATCACTCA
TGGATACTCCAAGCTCTGGAGAGTATATCTTGGATAATGAAAACCTAGAGCAAATGGATGAAGAGCAAAAAATCACCTTG
CGTCGTGAAAAAATAGGGCTTGTCTTTCAACAATTTCATCTTATCCCCTATCTTAACGCCTTAGAAAATGTTATGCTCTC
TCAGTATTATCACTCAAGCGTAGATGAAGAAGATGCCAAAATGGTTCTTGAAAAAATAGGACTTTCGCATAGACTCACTC
ATTTACCTAGCCAATTAAGTGGTGGAGAACAACAAAGAGTTTGCATAGCAAGAGCTTTGATCAACAACCCAGAGCTTTTA
CTCGCAGATGAACCCACAGGAAATTTAGATGAAGCCAATGAACAAATCGTTCTTCAAACCTTGCAAAAATTAAAAAATGA
AGGCAAAACCATAGTTTTAATCACACACAATCCTGATTTAGCCAAATTCGCAGATCGAACCCTTATCTTACAACATGGGG
TGTTAAAATGA

Protein sequence : 
MKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKITL
RREKIGLVFQQFHLIPYLNALENVMLSQYYHSSVDEEDAKMVLEKIGLSHRLTHLPSQLSGGEQQRVCIARALINNPELL
LADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ICDCCJ07001_1572 YP_004067063.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 2e-45 50
ICDCCJ07001_1572 YP_004067063.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 3e-30 44
ICDCCJ07001_1572 YP_004067063.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 1e-36 44
ICDCCJ07001_1572 YP_004067063.1 ABC transporter, ATP-binding protein NC_012469.1.7685735. Protein 4e-32 44
ICDCCJ07001_1572 YP_004067063.1 ABC transporter, ATP-binding protein NC_012469.1.7686946. Protein 1e-25 43