Gene Information

Name : ICDCCJ07001_1380 (ICDCCJ07001_1380)
Accession : YP_004066888.1
Strain : Campylobacter jejuni ICDCCJ07001
Genome accession: NC_014802
Putative virulence/resistance : Virulence
Product : capsular polysaccharide ABC transporter, ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1416472 - 1417134 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
ATGATAAAGCTTGTTAATCTTACTAAATCTTATCCCTTATTTAGTGGTGGAAGACATTATGTTTTTAAAAATTTTAGCTT
TGAATTTCCTGAAAATTGCAGTATAGGTTTGATGGGGAGTAACGGAGCTGGAAAATCCACTCTAATGCGACTTTTAAGCG
GTGCAGAGCTTCCTGATAGTGGTAAGATAATTACTAATAAAAAATTATCCTGGCCTTTGGGGTTAAACGGAGCTTTTCAA
GGTTCTTTAACCGCTAGAGATAATGCTAAATTTGTAGCTAGAGTATATGGTTATAAGGGCAAAGAACTTCAAGAAAAAGT
AAAATTCGTAGAAGATTTTGCAGAGCTTGGGAAATTTTTTGATGAGCCTATGAAGACTTATTCTTCGGGAATGAGCGCTA
GGATAGCTTTTGGACTTAGTATGGCCTTTGATTTTGATTATTATTTGATTGATGAAGCAGGAGCTGTTGGAGATCCTGCT
TTTAGGGAGAAAAGTGTGAAATTATATAGAGAAAGATTAAGCAAATCAAAAGTGATTATGGTATCTCATAATGTAGCTGA
AATTAAAGAATGGTGTGATAAAATAATTTATATGAAAAATGGACAAATTACGGTTTATGATGATATAGATGAAGGAATAG
CTGTATATCAAGGAAAAGTTTAA

Protein sequence : 
MIKLVNLTKSYPLFSGGRHYVFKNFSFEFPENCSIGLMGSNGAGKSTLMRLLSGAELPDSGKIITNKKLSWPLGLNGAFQ
GSLTARDNAKFVARVYGYKGKELQEKVKFVEDFAELGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPA
FREKSVKLYRERLSKSKVIMVSHNVAEIKEWCDKIIYMKNGQITVYDDIDEGIAVYQGKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 6e-58 59
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-58 57
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 3e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ICDCCJ07001_1380 YP_004066888.1 capsular polysaccharide ABC transporter, ATP-binding protein VFG1449 Protein 2e-58 59
ICDCCJ07001_1380 YP_004066888.1 capsular polysaccharide ABC transporter, ATP-binding protein VFG0696 Protein 2e-38 44
ICDCCJ07001_1380 YP_004066888.1 capsular polysaccharide ABC transporter, ATP-binding protein VFG0258 Protein 1e-37 43
ICDCCJ07001_1380 YP_004066888.1 capsular polysaccharide ABC transporter, ATP-binding protein VFG2563 Protein 2e-39 43