Gene Information

Name : ICDCCJ07001_pTet000023 (ICDCCJ07001_pTet000023)
Accession : YP_004065606.1
Strain :
Genome accession: NC_014801
Putative virulence/resistance : Virulence
Product : cmgB8
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3736
EC number : -
Position : 30124 - 30786 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAATGAGTTTAATACTGCAATAGATTATGAAGCAAGTTTTAGATACTTAATTGAAAAAAGTAATAAAAGAGCTTG
GCTTATTGCTTTTATTTCTATTTTTATAGCCATTATTTCCATTATAGCTGTTGTTTTACTTACTCCTTTAAAAACAATAG
AACCTTATGTAATAAGAGTAGACAATACTACAGGAATGGTTGATATTTTAACCATGCTTGATGAAAAAGAAATTAAAGCA
AATGAAGCATTAGATAAATATTTTATTAGCACTTATGTAAAAGCTAGAGAAGGCTATTATTATGATCTTTTAAATCAAGA
TTATTTACTTACTCAATTAATGAGTTCTGAAAAAGTAGCAAATGAATATAGGGCTTTATATGAAGGTGATAATGCAAGAG
ATCAAATTCTAAAAAACTCCAATGAAGTAAGTGTTCAAATTTTAAGTATTGTTTTAGGAGAAAGTAACGGAGTGAAAACT
GCTACAGTCAGGGCAATTATTACTACAAAAAATTTAACTTCCAAAGGAACAACTCAAGCAACAAAAGTAATAACATTAAG
TTATGACTATATCTTAGCAAAAGCTAGCGAAGAAAACAGATTTTTAAATCCTTTAGGTTTTAAAGTATTAACTTATAGAA
TTGATGACGAGGTGGCACAATGA

Protein sequence :
MKNEFNTAIDYEASFRYLIEKSNKRAWLIAFISIFIAIISIIAVVLLTPLKTIEPYVIRVDNTTGMVDILTMLDEKEIKA
NEALDKYFISTYVKAREGYYYDLLNQDYLLTQLMSSEKVANEYRALYEGDNARDQILKNSNEVSVQILSIVLGESNGVKT
ATVRAIITTKNLTSKGTTQATKVITLSYDYILAKASEENRFLNPLGFKVLTYRIDDEVAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwG YP_001610491.1 TrwG protein Virulence Not named Protein 6e-20 42
trwG CAD42859.1 TrwG protein Not tested trw-PAI Protein 4e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ICDCCJ07001_pTet000023 YP_004065606.1 cmgB8 VFG2266 Protein 7e-20 42