Gene Information

Name : PSM_B0518 (PSM_B0518)
Accession : YP_004065464.1
Strain :
Genome accession: NC_014800
Putative virulence/resistance : Resistance
Product : AcrB/AcrD/AcrF family metabolite exporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0841
EC number : -
Position : 571074 - 574139 bp
Length : 3066 bp
Strand : -
Note : -

DNA sequence :
ATGGGCTTTGCGCAACTATCTATTGAGAAAAAAGTCATTAGCTGGATGTTTACGCTGTTGCTGTTAATTGGCGGCAGTGT
ATCTTATTTTGATTTAGGCCAGCTGGAAGACCCTGAATTCACTTTAAAAAAAGCCATGGTGATCACTTTATACCCGGGCG
CCTCTCCACAGCAAGTCGAAGAAGAAGTCACATTTCCGATTGAAAATGCCATTCAACAGCTCCCCTATGTTGATTATGTC
ACCTCTATTTCATCCAATGGTAAATCACAAATTACCGTAGAAATGAAAAGCACCTATCGTAAACAAGAGCTTAGACAAAT
ATGGGATGAAATGCGTCGTAAAATAAACGACCTTAGCCCGTCGCTGCCAAGTGGTGTTTACCCCAGTAATGTGATTGATG
ATTTTGCCGATGTTTACGGCGTTATGTTTGCCGTCACGGGCGATGGCTACTCGTATGATGAATTAAAAGACTATGTTGAT
TATTTAAAACGTGAACTTGTTTTAGTCAAAGGAGTGAGCAAAGTTACAATTGCGGGCCAACAGCAGCCACAAGTAATGGT
TGAGGTATCGACGCAAAAGCTTGCCCAACTTGGTATTGCGCCTAGTCATATTTATGATTTACTGCAATCACAAAACACCG
TATCTAACGCTGGACGTATTCGCGTGGGTGATGAGTCTATTCGCTTGCACCCTACTGGTGAATTTAAAGATGTAAAAGAA
CTTGAAACCTTATTAATTTCAAAATCAGGTGCCAGCGAACTCATTTATCTAGGCGATGTTGCAAAGGTTTACCGTGAATA
TGCTGAAGTACCGACCAATGTGATTCATTACAATCAACAACAGGCTCTGCTTATTGGTGTGTCGTTTATGTCTGGGGTCA
ATGTTGTTGATGTGGGTAAACACATAGATGAGCACTTAGCATCTCTTGAGTATCAACGCCCGCATGGTATTGATATTAGC
TCAGTGTATAACCAACCTAAAGAAGTAGAGCAGTCGGTAGATGGCTTTATTGTTAGTTTAATAGAGGCCATTGCAATAGT
TATTGTAGTACTACTTATTTTTATGGGCTTTAAAAGTGGGGTTTTAATCGGCGGTATATTATTACTGACCGTATTAGGCA
CCTTTATATTTATGAAACTGTTTGCGATTGACTTACAACGTATATCATTAGGTGCGCTAATTATTGCACTAGGTATGCTG
GTCGATAACGCCATTGTTGTGACCGAAGGTATTCTCATCAACCTCAAGCGCGGACAAACAAAGCTTAAAGCGGCAGTTAA
TATTGTCGATCAAACTAAGTGGCCACTACTTGGCGCAACAGTTATTGCCATAACCGCTTTCGCACCGATTGGTTTAAGCT
CAGATGCCAGTGGTGAATTTGCTGGTAGCTTATTTTGGGTGCTGTTTATTTCTTTGCTCTTGAGCTGGATCACCGCAATT
ACGCTCACGCCGTTTTTTGCCCACTTGATGTTTAAAGAAACCGAATTTAAACACGAACATAATCAAGAGCATGAAGACCC
TTACCAAGGCATCATATTCAATGGTTATAAAGCGATATTAAATTTAGCTATGCGCTTTAGAAAAACAACCTTAGTCCTTA
TGGTTGCTCTTTTATGCAGCGCTGTAGTGGGGTTTGGTGCTGTGAAGCAATCATTTTTTCCAGCCTCGAATACCCCGATG
TTTTATGTCGATTACTGGCAAGATCAAGGCGCTGATATTCGCGCAACCCTTGAGGGCATTAAGCAGCTAGAAGCTTATTT
ACAAAAGAATGAACTGGTCACAGAAATCACCAGTACGGTTGGCCAAGGTGCGCCGCGTTTTATGCTGACTTACGCGCCTG
AAAAATCCTACCCTGCTTATGGACAGTTAATTATTCGTGTCACCAATCGTGAAGCCGTCGCAAAAGTCATGCAAAAAGTG
CGCGATTACGCAAAGCAACATCCACTGTCAGCAAAGTTAAAAGTAAAACCAATGGAGATTGGCCCCTCAACTGATGCCAA
AATAGAAGCGCGGTTCTCAGGCCCCGATCCGGTTGTTTTAAGACAGCTTTCATCACAGGCTAAAGAGATTATCGCTAAAG
ACGACGGTGCCTTTAACATTCGAGATGATTGGCGTGCACGCACTAAAATGATTCGTCCGCAATTTAATGAACAAAAAGCG
CGCCGTTTGGGGATCACCAAATTTGATCTTGACCAAGTTCTGTTAACGAGCCTGTCGGGTAAGCAAGTGGGTGTGTATCG
TGATGGTACGCAATTATTGCCTATTATTGCCCGTTCACCGGCAAGCGAGCGTTTAAATGTAGACAGTGTTCACGATTTAC
AAATTTATAGCCCTGTTTTACGCGTGTTTGTGCCGGTTACCCAAGTGGTTGATGAATTTATTGTTGAGTGGGAAGACAGC
TTAATTATGCGTCGCGATCGTAAACGCACCATTACTGTGATGGCAGATCATGATGTTTTGGGTGATGAAACGCCTGCAAA
ATTATTTGCTCGGGTTCGCGCTGAGGTTGAAGCAATTGATTTACCCCGTGGCTATGAAATGCAATGGGGCGGCGAGTTCG
AATCATCAAGCAAAGCGAAAAAGGCTATTTTTGGCTCGTTACCACTGGGCTATTTAGCAATGTTTGCAGTAACAGTATTA
CTGTTTAACTCAGTGAAAAAACCTTTGGTTATTTGGGCAACTGTACCGCTGGCTATTATTGGTGTTAGTGCAGGCTTATT
AGTGATGAATGCGCCGTTTAGCTTTATGGCGCTACTGGGCTTATTAAGCTTAAGCGGCATGCTAATTAAAAACGGCATTG
TACTGGTTGATCAAATAAACTTAGAACTGAGTGAAGGTAAATCGCCATATCAAGCAGTGTTTGACTCAGGCGTAAGCCGT
GTACGCCCTGTAGCCATGGCCGCTATCACGACAATACTTGGCATGATCCCATTACTATTCGATGTATTTTTTCAGTCGAT
GGCGGTCACCATTATGTTTGGCTTAGGGTTTGCCACCATACTTACGCTAATTGTAGTGCCGGTTTTATACACTGTGGTAT
TTAGGATTGATTACCCCAAACAGTAG

Protein sequence :
MGFAQLSIEKKVISWMFTLLLLIGGSVSYFDLGQLEDPEFTLKKAMVITLYPGASPQQVEEEVTFPIENAIQQLPYVDYV
TSISSNGKSQITVEMKSTYRKQELRQIWDEMRRKINDLSPSLPSGVYPSNVIDDFADVYGVMFAVTGDGYSYDELKDYVD
YLKRELVLVKGVSKVTIAGQQQPQVMVEVSTQKLAQLGIAPSHIYDLLQSQNTVSNAGRIRVGDESIRLHPTGEFKDVKE
LETLLISKSGASELIYLGDVAKVYREYAEVPTNVIHYNQQQALLIGVSFMSGVNVVDVGKHIDEHLASLEYQRPHGIDIS
SVYNQPKEVEQSVDGFIVSLIEAIAIVIVVLLIFMGFKSGVLIGGILLLTVLGTFIFMKLFAIDLQRISLGALIIALGML
VDNAIVVTEGILINLKRGQTKLKAAVNIVDQTKWPLLGATVIAITAFAPIGLSSDASGEFAGSLFWVLFISLLLSWITAI
TLTPFFAHLMFKETEFKHEHNQEHEDPYQGIIFNGYKAILNLAMRFRKTTLVLMVALLCSAVVGFGAVKQSFFPASNTPM
FYVDYWQDQGADIRATLEGIKQLEAYLQKNELVTEITSTVGQGAPRFMLTYAPEKSYPAYGQLIIRVTNREAVAKVMQKV
RDYAKQHPLSAKLKVKPMEIGPSTDAKIEARFSGPDPVVLRQLSSQAKEIIAKDDGAFNIRDDWRARTKMIRPQFNEQKA
RRLGITKFDLDQVLLTSLSGKQVGVYRDGTQLLPIIARSPASERLNVDSVHDLQIYSPVLRVFVPVTQVVDEFIVEWEDS
LIMRRDRKRTITVMADHDVLGDETPAKLFARVRAEVEAIDLPRGYEMQWGGEFESSSKAKKAIFGSLPLGYLAMFAVTVL
LFNSVKKPLVIWATVPLAIIGVSAGLLVMNAPFSFMALLGLLSLSGMLIKNGIVLVDQINLELSEGKSPYQAVFDSGVSR
VRPVAMAAITTILGMIPLLFDVFFQSMAVTIMFGLGFATILTLIVVPVLYTVVFRIDYPKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 0.0 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSM_B0518 YP_004065464.1 AcrB/AcrD/AcrF family metabolite exporter BAC0519 Protein 0.0 60
PSM_B0518 YP_004065464.1 AcrB/AcrD/AcrF family metabolite exporter BAC0428 Protein 0.0 60
PSM_B0518 YP_004065464.1 AcrB/AcrD/AcrF family metabolite exporter BAC0526 Protein 0.0 58
PSM_B0518 YP_004065464.1 AcrB/AcrD/AcrF family metabolite exporter BAC0425 Protein 0.0 43