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Name : lysS (CKC_04175) Accession : YP_004063072.1 Strain : Candidatus Liberibacter solanacearum CLso-ZC1 Genome accession: NC_014774 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 874681 - 876171 bp Length : 1491 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAATAACAGCACTCTCCCTGAATCTTTGTCTTCTCATTCCATTGAAGTTCGATCTCAAAAATTGAATATTCTTCGACA ATCTTTAGAAGAAGTTTATCCTGCCCATTTTCATCGCGATTTAACAAATGCTGAATTAAGTGAAAAATATTCTCATCTTC AAGACGATGAAAAATCTGAAGATATCGTCACCATTGCTGGACGGGTTTATTCTTCTCGTAATTCTGGAATGTTCATGGAT CTTCATGATGCAAGTGGTAAGATCCAGATCTTTACCCATAAAAACACAACTGATCAAGATTCACAGAATTTATTGCCTAT GATTGATCTGGGTGACATTATAGGAGTAACAGGACAAGTGCGTCGCACTAAACGTGGCGAGCTTACAGTTAACTCACAAA CAATTACGATGCTAACCAAAGCATTAAACTCAATACCAGAAACATACTATGGGCTTTCTGATATAGAAACCCGCTATCGC AAACGGTATCTAGATATTATCAGTAATCCTGATTCTAAATTACGTTTCCAACAAAGAAGCCGTATTATTTCCCAAATACG CCATTTTATGGAAAATAATGGATTTATGGAGGTGGAAACCCCTATATTACAACCCATTTACGGAGGGGCTACTGCTGATC CATTTATAACACATCATAATATCCTTAAGGCTGATATGTATCTACGTATTGCGCCTGAACTATATCTCAAACGCGTCCTA GTATCAGGACTTACCGATCAAGTATTCGAATTAAATCGTAACTTTCGTAATGAAGGAATATCTTCTAGACATAATCCAGA ATTTACAATGATAGAAGCCTATTGGGCTTATACTGATTATCGAGATATGATGAAACTAGTTGAAGATCTTTTTCATAATC TTGTTATAAGTCTTTACGGAAAAACAGATATTCCTTTTGGAAAAAAAGTCATTTCTTTCAAAAAACCATTTGCGTGCAAG TCTATGCCTCAATTAGTTAAGGAAGCAACAGGAATTGATTTTATGCTTTTAAAAAGCGACCAAGAAGCACGTGTTGCAGC ACAAAGCATTGGAATTGAAGTTGAAGAAGACGCCATATGGGGCGAAGTCATGATGAACCTTTTCGAAGAAAAAATTGAAA AAAATATTTTAAATCCAATGCATATTACAGATTTTCCCAAAGATATTTCTCCTTTTGCAAAAGAAGTTGTAGGAGAGAGC CGCCTTGTAGAACGGTTTGAAACCTATTGTAACGGATGGGAAATATGTAATGCTTTTTCCGAACTCAATGATCCCATCGA ACAACGTATACGTATGGAAAAACAACTCAAACAATCCCATAAACGTGGAGAAAAAATAATTCTTGATGAAGATTTTCTTG ATGCAATGACTTATGGCATGCCTCCAGCAAGCGGATTAGGGCTAGGCATTGATCGCCTGATCATGTTATTGACCAATGCT CCTTCTATTCGAGATGTGATTCTTTTCCCTGTACAGCGCTTAAAAAAATAA Protein sequence : MNNSTLPESLSSHSIEVRSQKLNILRQSLEEVYPAHFHRDLTNAELSEKYSHLQDDEKSEDIVTIAGRVYSSRNSGMFMD LHDASGKIQIFTHKNTTDQDSQNLLPMIDLGDIIGVTGQVRRTKRGELTVNSQTITMLTKALNSIPETYYGLSDIETRYR KRYLDIISNPDSKLRFQQRSRIISQIRHFMENNGFMEVETPILQPIYGGATADPFITHHNILKADMYLRIAPELYLKRVL VSGLTDQVFELNRNFRNEGISSRHNPEFTMIEAYWAYTDYRDMMKLVEDLFHNLVISLYGKTDIPFGKKVISFKKPFACK SMPQLVKEATGIDFMLLKSDQEARVAAQSIGIEVEEDAIWGEVMMNLFEEKIEKNILNPMHITDFPKDISPFAKEVVGES RLVERFETYCNGWEICNAFSELNDPIEQRIRMEKQLKQSHKRGEKIILDEDFLDAMTYGMPPASGLGLGIDRLIMLLTNA PSIRDVILFPVQRLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-99 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004063072.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 9e-100 | 44 |
