Gene Information

Name : CKC_01960 (CKC_01960)
Accession : YP_004062631.1
Strain : Candidatus Liberibacter solanacearum CLso-ZC1
Genome accession: NC_014774
Putative virulence/resistance : Unknown
Product : GMP synthase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0519
EC number : -
Position : 413988 - 415550 bp
Length : 1563 bp
Strand : +
Note : COG0518 GMP synthase - Glutamine amidotransferase domain

DNA sequence :
ATGCACGCAGGGAAAAAATCAAATAAGGTTCTTATTATTGATTTTGGAAGTCAGTTCACTCAGTTAATTGCGCGTTGTGT
ACGTGAAAACAAAGTTTATTGTGAAGTAATAGCATTTGAATGTGCTTTGGATTATTTTAGAAAGACAAGGCCTCAGGCAA
TTATTTTATCAGGTAGCCCTGCTTCACCCTTGGATATTGATAGCCCTCAAATTCCACAAGAGATTTTAGAATCAAATACT
CCTTTGTTAGGAATTTGTTATGGACAGCAGATTATGTGTACGTCTCTTGGAGGAACAATAAAAAAGTCGCAGAATCGTGA
ATTTGGTCGTGCTTTCATTGAGATAAAAAAAGATTGCTCATTATTAAAAGGCCTATGGGAAAAGGATTCTATACAACAGG
TTTGGATGAGTCATGGTGATCAAGTGGAGCGCATGCCAGAAGGATTCGAGGTAATTGCATCGTCGGACAACACCCCTTTT
GCCTTTGTCGCGGATGAAAAGAGAAAATATTATGCTGTTCAATTCCATCCAGAAGTTGTTCATACAGAAGGTGGATCTCA
ATTAATAGCTAATTTTGTGCGTGATGTTGCTGGTATCCAAGGTGATTGGATTATGTCTTCTTATCGCAAGGAAATTGTTT
CTTGTATTAAGAAACAAGTGGGTGATGAACGTGTAATTTGCGCCCTATCTGGAGGAGTTGATTCTTCTGTTGCTGCATTT
TTGATCTATGAGGCCATAGGGAAAAATCTTACTTGTGTGCTTGTTGATCATGGGTTTATGCGTAAGAACGAAGTGGATAA
TGTTGTTGGTTTATTTAAGAAATATCCGGATTTTCCATTGATAGTTGTAGATGCTTCAGAGAGATTCATTGGAAAACTGA
AAAATGTTATTGATCCAGAAGATAAGAGAAAAATTATAGGAAAATTATTTATAGAAGTTTTTGAAGAAGAGGCAGAAAAA
ATAGGTGGTGCTAAATTTCTTGGACAAGGGACTTTATATCCTGATGTTATTGAGAGTGTTTCTTTCTTTGGTGGGCCTTC
ATCTGTTATAAAATCGCATCATAATGTAGGAGGATTGCCTGAATACATGAATATGGATCTTGTCGAGCCATTAAGAGATC
TTTTTAAAGATGAGGTGCGTCTTCTTGGTAAGGAATTGGGATTGTCTGATAGTTTTATAGATCGCCATCCATGTCCAGGT
CCGGGGCTTGCTATTCGTTGTATTGGAGAAGTCACTGAGGAAAAAATAAATATTTTGCGTGAATCTGATGCTATTTATTG
TGAGGAAATTTGTAAAGCAGGAATTTATAATGAAATATGGCAGGCATTTACTGTCTTATTGCCCATTCAAACGGTAGGGG
TGATGGGTGATGAACGTACCTATGAGTGTGTTTGTTCTCTGAGGGCGGTAACATCAAGAGATGGGATGACTGCAGATTTT
TATCACCACGACATGGATTTTCTCAGTCAAGTGTCTACGCGAATAGTCAATGAAGTAAAGGGAATTAGTAGAGTCGTATA
TGATATAACCTCTAAACCGCCTGCAACTATTGAATGGGAATAA

Protein sequence :
MHAGKKSNKVLIIDFGSQFTQLIARCVRENKVYCEVIAFECALDYFRKTRPQAIILSGSPASPLDIDSPQIPQEILESNT
PLLGICYGQQIMCTSLGGTIKKSQNREFGRAFIEIKKDCSLLKGLWEKDSIQQVWMSHGDQVERMPEGFEVIASSDNTPF
AFVADEKRKYYAVQFHPEVVHTEGGSQLIANFVRDVAGIQGDWIMSSYRKEIVSCIKKQVGDERVICALSGGVDSSVAAF
LIYEAIGKNLTCVLVDHGFMRKNEVDNVVGLFKKYPDFPLIVVDASERFIGKLKNVIDPEDKRKIIGKLFIEVFEEEAEK
IGGAKFLGQGTLYPDVIESVSFFGGPSSVIKSHHNVGGLPEYMNMDLVEPLRDLFKDEVRLLGKELGLSDSFIDRHPCPG
PGLAIRCIGEVTEEKINILRESDAIYCEEICKAGIYNEIWQAFTVLLPIQTVGVMGDERTYECVCSLRAVTSRDGMTADF
YHHDMDFLSQVSTRIVNEVKGISRVVYDITSKPPATIEWE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAPIG0468 YP_005733278.1 GMP synthase [glutamine-hydrolyzing] (Glutamineamidotransferase) (GMP synthetase) Not tested SAPI-S0385 Protein 3e-124 53
SAMSHR1132_03620 YP_005324884.1 GMP synthase Not tested vSa¥á Protein 3e-124 53
guaA YP_001331415.1 GMP synthase Not tested vSa¥á Protein 3e-124 53
guaA NP_938969.1 GMP synthase Not tested Not named Protein 6e-111 47